PDB entry 6kml

View 6kml on RCSB PDB site
Description: 2.09 angstrom resolution crystal structure of tetrameric higba toxin- antitoxin complex from e.coli
Deposited on 2019-07-31, released 2020-11-18
The last revision was dated 2020-11-18, with a file datestamp of 2020-11-13.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: mRNA interferase toxin HigB
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: higB, ygjN, b3083, JW3054
    Database cross-references and differences (RAF-indexed):
    • Uniprot P64578 (14-End)
      • expression tag (11-13)
  • Chain 'B':
    Compound: antitoxin higa
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: higA, ygjM, b3082, JW3053
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: mRNA interferase toxin HigB
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: higB, ygjN, b3083, JW3054
    Database cross-references and differences (RAF-indexed):
    • Uniprot P64578 (14-End)
      • expression tag (11-13)
  • Chain 'D':
    Compound: antitoxin higa
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: higA, ygjM, b3082, JW3053
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6kmlA (A:)
mgsshhhhhhsqgsmhlitqkalkdaaekypqhktelvalgntiakgyfkkpeslkavfp
sldnfkyldkhyvfnvggnelrvvamvffesqkcyirevmthkeydfftavhrtkgkk

    Sequence, based on observed residues (ATOM records):
    >6kmlA (A:)
qgsmhlitqkalkdaaekypqhktelvalgntiakgyfkkpeslkavfpsldnfkyldkh
yvfnvggnelrvvamvffesqkcyirevmthkeydfftavhrt

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6kmlB (B:)
miaiadilqagekltavapflagiqneeqytqalelvdhlllndpenplldlvcakitaw
eesapefaefnamaqampggiavirtlmdqygltlsdlpeigsksmvsrvlsgkrkltle
hakklatrfgispalfid

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6kmlC (C:)
mgsshhhhhhsqgsmhlitqkalkdaaekypqhktelvalgntiakgyfkkpeslkavfp
sldnfkyldkhyvfnvggnelrvvamvffesqkcyirevmthkeydfftavhrtkgkk

    Sequence, based on observed residues (ATOM records):
    >6kmlC (C:)
qgsmhlitqkalkdaaekypqhktelvalgntiakgyfkkpeslkavfpsldnfkyldkh
yvfnvggnelrvvamvffesqkcyirevmthkeydfftavhrtkg

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6kmlD (D:)
miaiadilqagekltavapflagiqneeqytqalelvdhlllndpenplldlvcakitaw
eesapefaefnamaqampggiavirtlmdqygltlsdlpeigsksmvsrvlsgkrkltle
hakklatrfgispalfid