PDB entry 6kkm

View 6kkm on RCSB PDB site
Description: Crystal structure of RbcL-Raf1 complex from Anabaena sp. PCC 7120
Class: chaperone/photosynthesis
Keywords: RuBisCO, Chaperone, Raf1, RbcL, CHAPERONE-PHOTOSYNTHESIS complex
Deposited on 2019-07-26, released 2020-05-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-08, with a file datestamp of 2020-07-03.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribulose bisphosphate carboxylase large chain
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: cbbL, rbc, rbcA, rbcL, alr1524
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kkma1, d6kkma2
  • Chain 'B':
    Compound: ribulose bisphosphate carboxylase large chain
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: cbbL, rbc, rbcA, rbcL, alr1524
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kkmb1, d6kkmb2
  • Chain 'C':
    Compound: ribulose bisphosphate carboxylase large chain
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: cbbL, rbc, rbcA, rbcL, alr1524
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kkmc1, d6kkmc2
  • Chain 'D':
    Compound: ribulose bisphosphate carboxylase large chain
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: cbbL, rbc, rbcA, rbcL, alr1524
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kkmd1, d6kkmd2
  • Chain 'E':
    Compound: All5250 protein
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: all5250
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: All5250 protein
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: all5250
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: All5250 protein
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: all5250
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: All5250 protein
    Species: Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) [TaxId:103690]
    Gene: all5250
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6kkmA (A:)
mghhhhhhhhhhssgmsyaqtktqtksgykagvqdyrltyytpdytpkdtdilaafrvtp
qpgvpfeeaaaavaaesstgtwttvwtdlltdldrykgrcydiepvpgednqfiayiayp
ldlfeegsitnvltsivgnvfgfkalralrledirfpvayiktfqgpphgiqverdklnk
ygrpllgctikpklglsaknygravyeclrggldftkddeninsapfqrwrdrflfvada
itkaqaetgeikghylnvtaptceemlkraeyakelkqpiimhdyltagftanttlarwc
rdngvllhihramhavidrqknhgihfrvlakalrlsggdhihtgtvvgklegergitmg
fvdllrenyveqdksrgiyftqdwaslpgvmavasggihvwhmpalveifgddsvlqfgg
gtlghpwgnapgatanrvaleacvqarnegrnlaregndvireaakwspelavacelwke
ikfefeamdtv

    Sequence, based on observed residues (ATOM records): (download) 
    >6kkmA (A:)
ltyytpdytpkdtdilaafrvtpqpgvpfeeaaaavaaesstgtwttvwtdlltdldryk
grcydiepvpgednqfiayiaypldlfeegsitnvltsivgnvfgfkalralrledirfp
vayiktfqgpphgiqverdklnkygrpllgctikpklglsaknygravyeclrggldftk
ddeninsapfqrwrdrflfvadaitkaqaetgeikghylnvtaptceemlkraeyakelk
qpiimhdyltagftanttlarwcrdngvllhihramhavidrqknhgihfrvlakalrls
ggdhihtgtvvgklegergitmgfvdllrenyveqdksrgiyftqdwaslpgvmavasgg
ihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacvqarnegrnlareg
ndvireaakwspelavacelwkeikfefeam

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6kkmB (B:)
mghhhhhhhhhhssgmsyaqtktqtksgykagvqdyrltyytpdytpkdtdilaafrvtp
qpgvpfeeaaaavaaesstgtwttvwtdlltdldrykgrcydiepvpgednqfiayiayp
ldlfeegsitnvltsivgnvfgfkalralrledirfpvayiktfqgpphgiqverdklnk
ygrpllgctikpklglsaknygravyeclrggldftkddeninsapfqrwrdrflfvada
itkaqaetgeikghylnvtaptceemlkraeyakelkqpiimhdyltagftanttlarwc
rdngvllhihramhavidrqknhgihfrvlakalrlsggdhihtgtvvgklegergitmg
fvdllrenyveqdksrgiyftqdwaslpgvmavasggihvwhmpalveifgddsvlqfgg
gtlghpwgnapgatanrvaleacvqarnegrnlaregndvireaakwspelavacelwke
ikfefeamdtv

    Sequence, based on observed residues (ATOM records): (download) 
    >6kkmB (B:)
rltyytpdytpkdtdilaafrvtpqpgvpfeeaaaavaaesstgtwttvwtdlltdldry
kgrcydiepvpgednqfiayiaypldlfeegsitnvltsivgnvfgfkalralrledirf
pvayiktfqgpphgiqverdklnkygrpllgctikpklglsaknygravyeclrggldft
kddeninsapfqrwrdrflfvadaitkaqaetgeikghylnvtaptceemlkraeyakel
kqpiimhdyltagftanttlarwcrdngvllhihramhavidrqknhgihfrvlakalrl
sggdhihtgtvvgklegergitmgfvdllrenyveqdksrgiyftqdwaslpgvmavasg
gihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacvqarnegrnlare
gndvireaakwspelavacelwkei

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6kkmC (C:)
mghhhhhhhhhhssgmsyaqtktqtksgykagvqdyrltyytpdytpkdtdilaafrvtp
qpgvpfeeaaaavaaesstgtwttvwtdlltdldrykgrcydiepvpgednqfiayiayp
ldlfeegsitnvltsivgnvfgfkalralrledirfpvayiktfqgpphgiqverdklnk
ygrpllgctikpklglsaknygravyeclrggldftkddeninsapfqrwrdrflfvada
itkaqaetgeikghylnvtaptceemlkraeyakelkqpiimhdyltagftanttlarwc
rdngvllhihramhavidrqknhgihfrvlakalrlsggdhihtgtvvgklegergitmg
fvdllrenyveqdksrgiyftqdwaslpgvmavasggihvwhmpalveifgddsvlqfgg
gtlghpwgnapgatanrvaleacvqarnegrnlaregndvireaakwspelavacelwke
ikfefeamdtv

    Sequence, based on observed residues (ATOM records): (download) 
    >6kkmC (C:)
rltyytpdytpkdtdilaafrvtpqpgvpfeeaaaavaaesstgtwttvwtdlltdldry
kgrcydiepvpgednqfiayiaypldlfeegsitnvltsivgnvfgfkalralrledirf
pvayiktfqgpphgiqverdklnkygrpllgctikpklglsaknygravyeclrggldft
kddeninsapfqrwrdrflfvadaitkaqaetgeikghylnvtaptceemlkraeyakel
kqpiimhdyltagftanttlarwcrdngvllhihramhavidrqknhgihfrvlakalrl
sggdhihtgtvvgklegergitmgfvdllrenyveqdksrgiyftqdwaslpgvmavasg
gihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacvqarnegrnlare
gndvireaakwspelavacelwkeikfefeam

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6kkmD (D:)
mghhhhhhhhhhssgmsyaqtktqtksgykagvqdyrltyytpdytpkdtdilaafrvtp
qpgvpfeeaaaavaaesstgtwttvwtdlltdldrykgrcydiepvpgednqfiayiayp
ldlfeegsitnvltsivgnvfgfkalralrledirfpvayiktfqgpphgiqverdklnk
ygrpllgctikpklglsaknygravyeclrggldftkddeninsapfqrwrdrflfvada
itkaqaetgeikghylnvtaptceemlkraeyakelkqpiimhdyltagftanttlarwc
rdngvllhihramhavidrqknhgihfrvlakalrlsggdhihtgtvvgklegergitmg
fvdllrenyveqdksrgiyftqdwaslpgvmavasggihvwhmpalveifgddsvlqfgg
gtlghpwgnapgatanrvaleacvqarnegrnlaregndvireaakwspelavacelwke
ikfefeamdtv

    Sequence, based on observed residues (ATOM records): (download) 
    >6kkmD (D:)
rltyytpdytpkdtdilaafrvtpqpgvpfeeaaaavaaesstgtwttvwtdlltdldry
kgrcydiepvpgednqfiayiaypldlfeegsitnvltsivgnvfgfkalralrledirf
pvayiktfqgpphgiqverdklnkygrpllgctikpklglsaknygravyeclrggldft
kddeninsapfqrwrdrflfvadaitkaqaetgeikghylnvtaptceemlkraeyakel
kqpiimhdyltagftanttlarwcrdngvllhihramhavidrqknhgihfrvlakalrl
sggdhihtgtvvgklegergitmgfvdllrenyveqdksrgiyftqdwaslpgvmavasg
gihvwhmpalveifgddsvlqfgggtlghpwgnapgatanrvaleacvqarnegrnlare
gndvireaakwspelavacelwkei

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.