PDB entry 6khx

View 6khx on RCSB PDB site
Description: Crystal structure of Prx from Akkermansia muciniphila
Class: oxidoreductase
Keywords: Peroxiredoxins; Akkermansia muciniphila; Crystal structure; peroxidase activity, OXIDOREDUCTASE
Deposited on 2019-07-16, released 2020-02-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-06-10, with a file datestamp of 2020-06-05.
Experiment type: XRAY
Resolution: 2.58 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-209)
    Domains in SCOPe 2.08: d6khxa1, d6khxa2
  • Chain 'B':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-210)
    Domains in SCOPe 2.08: d6khxb1, d6khxb2
  • Chain 'C':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-210)
    Domains in SCOPe 2.08: d6khxc1, d6khxc2
  • Chain 'D':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-210)
    Domains in SCOPe 2.08: d6khxd1, d6khxd2
  • Chain 'E':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6khxe1, d6khxe2
  • Chain 'F':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-210)
    Domains in SCOPe 2.08: d6khxf1, d6khxf2
  • Chain 'G':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-208)
    Domains in SCOPe 2.08: d6khxg1, d6khxg2
  • Chain 'H':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-208)
    Domains in SCOPe 2.08: d6khxh1, d6khxh2
  • Chain 'I':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-210)
    Domains in SCOPe 2.08: d6khxi1, d6khxi2
  • Chain 'J':
    Compound: peroxiredoxin
    Species: Akkermansia muciniphila [TaxId:239935]
    Gene: CXU17_12910, CXU19_10505
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2N8HPY4 (0-206)
      • expression tag (207-210)
    Domains in SCOPe 2.08: d6khxj1, d6khxj2
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6khxA (A:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxA (A:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylskleh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6khxB (B:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxB (B:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehh

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6khxC (C:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxC (C:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehh

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6khxD (D:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxD (D:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelygevc
plgwhkgeaamtpshegvasylsklehh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6khxE (E:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxE (E:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylskl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6khxF (F:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxF (F:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehh

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6khxG (G:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxG (G:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylskle

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6khxH (H:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxH (H:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
nvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelygevcplg
whkgeaamtpshegvasylskle

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6khxI (I:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxI (I:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehh

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >6khxJ (J:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
eidedgnvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelyg
evcplgwhkgeaamtpshegvasylsklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6khxJ (J:)
mlligkpaphfsanavvngtivpdfsldqfkgkkyvilffypkdftfvcpteligfqeal
gefdkrdvavvgcstdsefshwawvntprdqggiqgvsypivsdinktisadygvlagde
einvevngeliayrglflidkdgivrhqlindfplgrsideairvvdalqhfelygevcp
lgwhkgeaamtpshegvasylsklehh