PDB entry 6ke9

View 6ke9 on RCSB PDB site
Description: The Human Telomeric Nucleosome Displays Distinct Structural and Dynamic Properties
Class: DNA binding protein/DNA
Keywords: Telomeric DNA, Nucleosome Core Particle, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex
Deposited on 2019-07-04, released 2020-04-22
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-06-10, with a file datestamp of 2020-06-05.
Experiment type: XRAY
Resolution: 2.22 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone H3.1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9a_
  • Chain 'B':
    Compound: histone h4
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9b_
  • Chain 'C':
    Compound: Histone H2A type 1-B/E
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9c_
  • Chain 'D':
    Compound: Histone H2B type 1-K
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9d_
  • Chain 'E':
    Compound: Histone H3.1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9e_
  • Chain 'F':
    Compound: histone h4
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9f_
  • Chain 'G':
    Compound: Histone H2A type 1-B/E
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9g_
  • Chain 'H':
    Compound: Histone H2B type 1-K
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6ke9h_
  • Chain 'I':
    Compound: Human telomeric DNA (145-MER)
    Species: Homo sapiens [TaxId:9606]
  • Chain 'J':
    Compound: Human telomeric DNA (145-MER)
    Species: Homo sapiens [TaxId:9606]
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6ke9A (A:)
ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceay
lvglfedtnlcaihakrvtimpkdiqlarrirgera

    Sequence, based on observed residues (ATOM records): (download) 
    >6ke9A (A:)
ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceay
lvglfedtnlcaihakrvtimpkdiqlarrirger

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ke9B (B:)
krhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtyteh
akrktvtamdvvyalkrqgrtlygfgg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6ke9C (C:)
aktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardn
kktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk

    Sequence, based on observed residues (ATOM records): (download) 
    >6ke9C (C:)
trssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkk
triiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ke9D (D:)
rsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstit
sreiqtavrlllpgelakhavsegtkavtkytsak

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ke9E (E:)
ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaceay
lvglfedtnlcaihakrvtimpkdiqlarrirgera

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6ke9F (F:)
krhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtyteh
akrktvtamdvvyalkrqgrtlygfgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6ke9F (F:)
niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtam
dvvyalkrqgrtlygfgg

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6ke9G (G:)
aktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardn
kktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6ke9H (H:)
rsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstit
sreiqtavrlllpgelakhavsegtkavtkytsak

    Sequence, based on observed residues (ATOM records): (download) 
    >6ke9H (H:)
rsrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstit
sreiqtavrlllpgelakhavsegtkavtkytsa

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.