PDB entry 6kd6

View 6kd6 on RCSB PDB site
Description: Shuguo PWWP domain
Class: DNA binding protein
Keywords: PWWP, histone reader, DNA binding, NUCLEAR PROTEIN, DNA BINDING PROTEIN
Deposited on 2019-07-01, released 2020-07-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-01, with a file datestamp of 2020-06-26.
Experiment type: XRAY
Resolution: 1.58 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: LD23804p
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: DmelCG7946, CG7946, Dmel_CG7946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kd6a_
  • Chain 'B':
    Compound: LD23804p
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: DmelCG7946, CG7946, Dmel_CG7946
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9VAA9 (1-84)
      • expression tag (0)
    Domains in SCOPe 2.08: d6kd6b1, d6kd6b2
  • Chain 'C':
    Compound: LD23804p
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: DmelCG7946, CG7946, Dmel_CG7946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kd6c_
  • Chain 'D':
    Compound: LD23804p
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: DmelCG7946, CG7946, Dmel_CG7946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6kd6d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6kd6A (A:)
sasysigdlvfakvkgyppwpakitksnnnkkynvyfygtgetanikledlfpyasnker
fatekimkrakfieaidqiesalrg

    Sequence, based on observed residues (ATOM records): (download) 
    >6kd6A (A:)
asysigdlvfakvkgyppwpakitksnkkynvyfygtgetanikledlfpyasnkerfat
ekimkrakfieaidqiesal

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6kd6B (B:)
sasysigdlvfakvkgyppwpakitksnnnkkynvyfygtgetanikledlfpyasnker
fatekimkrakfieaidqiesalrg

    Sequence, based on observed residues (ATOM records): (download) 
    >6kd6B (B:)
sasysigdlvfakvkgyppwpakitksnnkkynvyfygtgetanikledlfpyasnkerf
atekimkrakfieaidqiesalrg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6kd6C (C:)
sasysigdlvfakvkgyppwpakitksnnnkkynvyfygtgetanikledlfpyasnker
fatekimkrakfieaidqiesalrg

    Sequence, based on observed residues (ATOM records): (download) 
    >6kd6C (C:)
asysigdlvfakvkgyppwpakitksnkkynvyfygtgetanikledlfpyasnkerfat
ekimkrakfieaidqiesalr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6kd6D (D:)
sasysigdlvfakvkgyppwpakitksnnnkkynvyfygtgetanikledlfpyasnker
fatekimkrakfieaidqiesalrg

    Sequence, based on observed residues (ATOM records): (download) 
    >6kd6D (D:)
sysigdlvfakvkgyppwpakitkskkynvyfygtgetanikledlfpyasnkerfatek
imkrakfieaidqiesalrg