PDB entry 6kbe
View 6kbe on RCSB PDB site
Description: Structure of Deubiquitinase
Class: hydrolase
Keywords: In complex with M1 type diUb, HYDROLASE
Deposited on
2019-06-24, released
2020-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-06-24, with a file datestamp of
2020-06-19.
Experiment type: XRAY
Resolution: 2.34 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'B':
Compound: ubiquitin thioesterase
Species: Oryza sativa subsp. japonica [TaxId:39947]
Gene: OsJ_28104
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6kbeb_ - Chain 'G':
Compound: Polyubiquitin-C
Species: Homo sapiens [TaxId:9606]
Gene: UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6kbeg1, d6kbeg2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6kbeB (B:)
gsklpyvgdkeplstlaaefqsgspilqekikllgeqydalrrtrgdgncfyrsfmfsyl
ehiletqdkaeverilkkieqckktladlgyieftfedffsifidqlesvlqghessiga
eellertrdqmvsdyvvmffrfvtsgeiqrraeffepfisgltnstvvqfckasvepmge
esdhvhiialsdalgvpirvmyldrsscdagnisvnhhdfspeanssdgaaaaekpyitl
lyrpghydilypk
Sequence, based on observed residues (ATOM records): (download)
>6kbeB (B:)
lpyvgdkeplstlaaefqsgspilqekikllgeqydalrrtrgdgncfyrsfmfsylehi
letqdkaeverilkkieqckktladlgyieftfedffsifidqlesvlqghessigaeel
lertrdqmvsdyvvmffrfvtsgeiqrraeffepfisgltnstvvqfckasvepmgeesd
hvhiialsdalgvpirvmyldrsscdagnisvnhhdfspekpyitllyrpghydilypk
- Chain 'G':
Sequence, based on SEQRES records: (download)
>6kbeG (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgamqifvktltgktitlevepsdtienvkakiqdkegippdqqrli
fagkqledgrtlsdyniqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>6kbeG (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgamqifvktltgktitlevepsdtienvkakiqdkegippdqqrli
fagkqledgrtlsdyniqkestlhlvlrlr