PDB entry 6ka0

View 6ka0 on RCSB PDB site
Description: silver-bound e.coli malate dehydrogenase
Deposited on 2019-06-19, released 2020-06-17
The last revision was dated 2020-06-17, with a file datestamp of 2020-06-12.
Experiment type: XRAY
Resolution: 2.22 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: malate dehydrogenase
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: MDH
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: malate dehydrogenase
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: MDH
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: malate dehydrogenase
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: MDH
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: malate dehydrogenase
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: MDH
    Database cross-references and differences (RAF-indexed):
  • Heterogens: AG, TRS, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6ka0A (A:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvarkpgmdrsdlfnvnagivknlvqqvaktcpkacigiitnp
vnttvaiaaevlkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgv
tilpllsqvpgvsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvr
alqgeqgvvecayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlk
kdialgeefvnk

    Sequence, based on observed residues (ATOM records):
    >6ka0A (A:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvarkpgmdrsdlfnvnagivknlvqqvaktcpkacigiitnp
vnttvaiaaevlkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgv
tilpllsqvpgvsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvr
alqgeqgvvecayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlk
kdialgeefvn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6ka0B (B:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvarkpgmdrsdlfnvnagivknlvqqvaktcpkacigiitnp
vnttvaiaaevlkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgv
tilpllsqvpgvsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvr
alqgeqgvvecayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlk
kdialgeefvnk

    Sequence, based on observed residues (ATOM records):
    >6ka0B (B:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvfnvnagivknlvqqvaktcpkacigiitnpvnttvaiaaev
lkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgvtilpllsqvpg
vsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvralqgeqgvvec
ayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlkkdialgeefvn

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6ka0C (C:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvarkpgmdrsdlfnvnagivknlvqqvaktcpkacigiitnp
vnttvaiaaevlkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgv
tilpllsqvpgvsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvr
alqgeqgvvecayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlk
kdialgeefvnk

    Sequence, based on observed residues (ATOM records):
    >6ka0C (C:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvfnvnagivknlvqqvaktcpkacigiitnpvnttvaiaaev
lkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgvtilpllsqvpg
vsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvralqgeqgvvec
ayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlkkdialgeefvn

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6ka0D (D:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvarkpgmdrsdlfnvnagivknlvqqvaktcpkacigiitnp
vnttvaiaaevlkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgv
tilpllsqvpgvsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvr
alqgeqgvvecayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlk
kdialgeefvnk

    Sequence, based on observed residues (ATOM records):
    >6ka0D (D:)
mkvavlgaaggigqalalllktqlpsgselslydiapvtpgvavdlshiptavkikgfsg
edatpalegadvvlisagvfnvnagivknlvqqvaktcpkacigiitnpvnttvaiaaev
lkkagvydknklfgvttldiirsntfvaelkgkqpgevevpvigghsgvtilpllsqvpg
vsfteqevadltkriqnagtevveakagggsatlsmgqaaarfglslvralqgeqgvvec
ayvegdgqyarffsqplllgkngveerksigtlsafeqnalegmldtlkkdialgeefvn