PDB entry 6k6s

View 6k6s on RCSB PDB site
Description: structure of rnase j1 from staphylococcus epidermidis
Deposited on 2019-06-04, released 2020-10-07
The last revision was dated 2020-10-07, with a file datestamp of 2020-10-02.
Experiment type: XRAY
Resolution: 2.99 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribonuclease j 1
    Species: Staphylococcus epidermidis ATCC 12228 [TaxId:176280]
    Gene: rnj1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ribonuclease j 1
    Species: Staphylococcus epidermidis ATCC 12228 [TaxId:176280]
    Gene: rnj1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6k6sA (A:)
mgsshhhhhhsqdpmkqlhsnevgvyalgglgevgkntyaveykdeiviidagikfpddn
llgidyvipdytyleqnqdkivglfithghedhiggvpfllkqinvpiyggplalglirn
kleehhllrttelheidessvikskhfeisfyltthsipeaygvivdtpegkivhtgdfk
fdftpvgepaniakmaqlghegvlcllsdstnalvpdftlserevgqnvdkifrnckgri
ifatfasniyrvqqaveaaikynrkivtfgrsmennikigmelgyikappetfiepnkin
svpkhellilctgsqgepmaalsriangthkqikiipedtvvfssspipgntksinrtin
alykagadvihskisnihtsghgsqgdqqlmlrliqpkyflpihgeyrmlkahgetgvqc
gvdednvfifdigdvlalthdsarkagripsgnvlvdgsgigdignvvirdrkllseegl
vivvvsidfntnkllsgpdiisrgfvymresgqliydaqrkikgdvisklnsnkdiqwhq
ikssiietlhpylyektarkpmilpvimkvnedk

    Sequence, based on observed residues (ATOM records):
    >6k6sA (A:)
lhsnevgvyalgglgevgkntyaveykdeiviidagikfpddnllgidyvipdytyleqn
qdkivglfithghedhiggvpfllkqinvpiyggplalglirnkleehhllrttelheid
essvikskhfeisfyltthsipeaygvivdtpegkivhtgdfkfdftpvgepaniakmaq
lghegvlcllsdstnalvpdftlserevgqnvdkifrnckgriifatfasniyrvqqave
aaikynrkivtfgrsmennikigmelgyikappetfiepnkinsvpkhellilctgsqge
pmaalsriangthkqikiipedtvvfssspipgntksinrtinalykagadvihskisni
htsghgsqgdqqlmlrliqpkyflpihgeyrmlkahgetgvqcgvdednvfifdigdvla
lthdsarkagripsgnvlvdgsg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6k6sB (B:)
mgsshhhhhhsqdpmkqlhsnevgvyalgglgevgkntyaveykdeiviidagikfpddn
llgidyvipdytyleqnqdkivglfithghedhiggvpfllkqinvpiyggplalglirn
kleehhllrttelheidessvikskhfeisfyltthsipeaygvivdtpegkivhtgdfk
fdftpvgepaniakmaqlghegvlcllsdstnalvpdftlserevgqnvdkifrnckgri
ifatfasniyrvqqaveaaikynrkivtfgrsmennikigmelgyikappetfiepnkin
svpkhellilctgsqgepmaalsriangthkqikiipedtvvfssspipgntksinrtin
alykagadvihskisnihtsghgsqgdqqlmlrliqpkyflpihgeyrmlkahgetgvqc
gvdednvfifdigdvlalthdsarkagripsgnvlvdgsgigdignvvirdrkllseegl
vivvvsidfntnkllsgpdiisrgfvymresgqliydaqrkikgdvisklnsnkdiqwhq
ikssiietlhpylyektarkpmilpvimkvnedk

    Sequence, based on observed residues (ATOM records):
    >6k6sB (B:)
hsnevgvyalgglgevgkntyaveykdeiviidagikfpddnllgidyvipdytyleqnq
dkivglfithghedhiggvpfllkqinvpiyggplalglirnkleehhllrttelheide
ssvikskhfeisfyltthsipeaygvivdtpegkivhtgdfkfdftpvgepaniakmaql
ghegvlcllsdstnalvpdftlserevgqnvdkifrnckgriifatfasniyrvqqavea
aikynrkivtfgrsmennikigmelgyikappetfiepnkinsvpkhellilctgsqgep
maalsriangthkqikiipedtvvfssspipgntksinrtinalykagadvihskisnih
tsghgsqgdqqlmlrliqpkyflpihgeyrmlkahgetgvqcgvdednvfifdigdvlal
thdsarkagripsgnvlvdgs