PDB entry 6jyj

View 6jyj on RCSB PDB site
Description: crystal structure of fam46b (tent5b)
Deposited on 2019-04-26, released 2020-03-04
The last revision was dated 2020-03-18, with a file datestamp of 2020-03-13.
Experiment type: XRAY
Resolution: 2.69 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Terminal nucleotidyltransferase 5B
    Species: Xenopus tropicalis [TaxId:8364]
    Gene: tent5b, fam46b
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Terminal nucleotidyltransferase 5B
    Species: Xenopus tropicalis [TaxId:8364]
    Gene: tent5b, fam46b
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Terminal nucleotidyltransferase 5B
    Species: Xenopus tropicalis [TaxId:8364]
    Gene: tent5b, fam46b
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FLC, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jyjA (A:)
gphmggsmssalsqasptaprfsvlswpqvrrldailcesvpihgrgnfptlscrprdlv
qvvrsrleqkgilvhnvrlngsaasyvlhhdsglgykdldlifmvdlkgpdafqvvkhav
lnclldflpsgvnkekitpmtlkeayvqklvkvctesdrwslislsnnsgknmelkfvds
lrrqfefsvdsfqiildsmlmfsqcsenpmsqsfhptvtgesmygdfeeamdhlrnriia
trnpeeirgggllkycnllvrgfrpksevdmktmqrymcsryfidfpdireqqrklkcyl
qdhfvgmedkrydylmtlhqvvnestvclmgherrqtlaliaslavhvlseqnhpqavpt
ftcyyqpapyigevnynsyyftpvqplmscshsyqtwlpccn

    Sequence, based on observed residues (ATOM records):
    >6jyjA (A:)
aprfsvlswpqvrrldailcesvpihgrgnfptlscrprdlvqvvrsrleqkgilvhnvr
lngsaasyvlhhdsglgykdldlifmvdlkgpdafqvvkhavlnclldflpsgvkitpmt
lkeayvqklvkvctesdrwslislsnnsgknmelkfvdslrrqfefsvdsfqiildsmlm
fsqnpmsqsfhptvtgesmygdfeeamdhlrnriiatrnpeeirgggllkycnllvrgfr
pksevdmktmqrymcsryfidfpdireqqrklkcylqdhfvgmedkrydylmtlhqvvne
stvclmgherrqtlaliaslavhvlseqn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jyjB (B:)
gphmggsmssalsqasptaprfsvlswpqvrrldailcesvpihgrgnfptlscrprdlv
qvvrsrleqkgilvhnvrlngsaasyvlhhdsglgykdldlifmvdlkgpdafqvvkhav
lnclldflpsgvnkekitpmtlkeayvqklvkvctesdrwslislsnnsgknmelkfvds
lrrqfefsvdsfqiildsmlmfsqcsenpmsqsfhptvtgesmygdfeeamdhlrnriia
trnpeeirgggllkycnllvrgfrpksevdmktmqrymcsryfidfpdireqqrklkcyl
qdhfvgmedkrydylmtlhqvvnestvclmgherrqtlaliaslavhvlseqnhpqavpt
ftcyyqpapyigevnynsyyftpvqplmscshsyqtwlpccn

    Sequence, based on observed residues (ATOM records):
    >6jyjB (B:)
sptaprfsvlswpqvrrldailcesvpihgrgnfptlscrprdlvqvvrsrleqkgilvh
nvrlngsaasyvlhhdsglgykdldlifmvdlkgpdafqvvkhavlnclldflpsnkeki
tpmtlkeayvqklvkvctesdrwslislsnnsgknmelkfvdslrrqfefsvdsfqiild
smlmfnpmsqsfhptvtgesmygdfeeamdhlrnriiatrnpeeirgggllkycnllvrg
frpksevdmktmqrymcsryfidfpdireqqrklkcylqdhfvgmedkrydylmtlhqvv
nestvclmgherrqtlaliaslavhvlseq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jyjC (C:)
gphmggsmssalsqasptaprfsvlswpqvrrldailcesvpihgrgnfptlscrprdlv
qvvrsrleqkgilvhnvrlngsaasyvlhhdsglgykdldlifmvdlkgpdafqvvkhav
lnclldflpsgvnkekitpmtlkeayvqklvkvctesdrwslislsnnsgknmelkfvds
lrrqfefsvdsfqiildsmlmfsqcsenpmsqsfhptvtgesmygdfeeamdhlrnriia
trnpeeirgggllkycnllvrgfrpksevdmktmqrymcsryfidfpdireqqrklkcyl
qdhfvgmedkrydylmtlhqvvnestvclmgherrqtlaliaslavhvlseqnhpqavpt
ftcyyqpapyigevnynsyyftpvqplmscshsyqtwlpccn

    Sequence, based on observed residues (ATOM records):
    >6jyjC (C:)
aprfsvlswpqvrrldailcesvpihgrgnfptlscrprdlvqvvrsrleqkgilvhnvr
lngsaasyvlhhdsglgykdldlifmvdlkgpdafqvvkhavlnclldflpvnkekitpm
tlkeayvqklvkvctesdrwslislsnnsgknmelkfvdslrrqfefsvdsfqiildsml
mfenpmsqsfhptvtgesmygdfeeamdhlrnriiatrnpeeirgggllkycnllvrgfr
pksevdmktmqrymcsryfidfpdireqqrklkcylqdhfvgmedkrydylmtlhqvvne
stvclmgherrqtlaliaslavhvlseqnh