PDB entry 6jyg

View 6jyg on RCSB PDB site
Description: Crystal Structure of L-threonine dehydrogenase from Phytophthora infestans
Class: oxidoreductase
Keywords: L-threonine dehydrogenase, OXIDOREDUCTASE
Deposited on 2019-04-26, released 2020-04-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-10-14, with a file datestamp of 2020-10-09.
Experiment type: XRAY
Resolution: 2.31 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-threonine 3-dehydrogenase, putative
    Species: Phytophthora infestans (strain T30-4) [TaxId:403677]
    Gene: PITG_05140
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jyga_
  • Chain 'B':
    Compound: L-threonine 3-dehydrogenase, putative
    Species: Phytophthora infestans (strain T30-4) [TaxId:403677]
    Gene: PITG_05140
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jygb_
  • Chain 'C':
    Compound: L-threonine 3-dehydrogenase, putative
    Species: Phytophthora infestans (strain T30-4) [TaxId:403677]
    Gene: PITG_05140
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jygc_
  • Chain 'D':
    Compound: L-threonine 3-dehydrogenase, putative
    Species: Phytophthora infestans (strain T30-4) [TaxId:403677]
    Gene: PITG_05140
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jygd_
  • Chain 'E':
    Compound: L-threonine 3-dehydrogenase, putative
    Species: Phytophthora infestans (strain T30-4) [TaxId:403677]
    Gene: PITG_05140
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jyge_
  • Chain 'F':
    Compound: L-threonine 3-dehydrogenase, putative
    Species: Phytophthora infestans (strain T30-4) [TaxId:403677]
    Gene: PITG_05140
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jygf_
  • Heterogens: NAD, FLC, PE8, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jygA (A:)
misatrlqravrpaarafsqsanpsrilvtggtgqigmelvpymrqlfgadtivnsdika
pggghrdgnfvycdvqdrdsmarivteqgvdtivhmasllsavgeanpslalsvntrgiq
nvlelakqyqlrvfapstiavfgpstpqdetpdttimrpttmygltkvhvellgeyyynk
fgvdfrsvrypgvissealpgggttdyaveifyealkhgkytcflnrdaklpmmympdcl
katmglinapndclsqrtynitavsftpeeivasiqkvmpsfqcdykpdfrqqiaetwpr
siddsiarkdwnwqhdfdldsmvedmlvkldaklskpeaaveeta

    Sequence, based on observed residues (ATOM records): (download) 
    >6jygA (A:)
srilvtggtgqigmelvpymrqlfgadtivnsdikapgdgnfvycdvqdrdsmarivteq
gvdtivhmasllsavgeanpslalsvntrgiqnvlelakqyqlrvfapstiavfgpstpq
detpdttimrpttmygltkvhvellgeyyynkfgvdfrsvrypgvissealpgggttdya
veifyealkhgkytcflnrdaklpmmympdclkatmglinapndclsqrtynitavsftp
eeivasiqkvmpsfqcdykpdfrqqiaetwprsiddsiarkdwnwqhdfdldsmvedmlv
kldakl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jygB (B:)
misatrlqravrpaarafsqsanpsrilvtggtgqigmelvpymrqlfgadtivnsdika
pggghrdgnfvycdvqdrdsmarivteqgvdtivhmasllsavgeanpslalsvntrgiq
nvlelakqyqlrvfapstiavfgpstpqdetpdttimrpttmygltkvhvellgeyyynk
fgvdfrsvrypgvissealpgggttdyaveifyealkhgkytcflnrdaklpmmympdcl
katmglinapndclsqrtynitavsftpeeivasiqkvmpsfqcdykpdfrqqiaetwpr
siddsiarkdwnwqhdfdldsmvedmlvkldaklskpeaaveeta

    Sequence, based on observed residues (ATOM records): (download) 
    >6jygB (B:)
srilvtggtgqigmelvpymrqlfgadtivnsdikapgdgnfvycdvqdrdsmarivteq
gvdtivhmasllsavgeanpslalsvntrgiqnvlelakqyqlrvfapstiavfgpstpq
detpdttimrpttmygltkvhvellgeyyynkfgvdfrsvrypgvissealpgggttdya
veifyealkhgkytcflnrdaklpmmympdclkatmglinapndclsqrtynitavsftp
eeivasiqkvmpsfqcdykpdfrqqiaetwprsiddsiarkdwnwqhdfdldsmvedmlv
kldakl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6jygC (C:)
misatrlqravrpaarafsqsanpsrilvtggtgqigmelvpymrqlfgadtivnsdika
pggghrdgnfvycdvqdrdsmarivteqgvdtivhmasllsavgeanpslalsvntrgiq
nvlelakqyqlrvfapstiavfgpstpqdetpdttimrpttmygltkvhvellgeyyynk
fgvdfrsvrypgvissealpgggttdyaveifyealkhgkytcflnrdaklpmmympdcl
katmglinapndclsqrtynitavsftpeeivasiqkvmpsfqcdykpdfrqqiaetwpr
siddsiarkdwnwqhdfdldsmvedmlvkldaklskpeaaveeta

    Sequence, based on observed residues (ATOM records): (download) 
    >6jygC (C:)
srilvtggtgqigmelvpymrqlfgadtivnsdikapgdgnfvycdvqdrdsmarivteq
gvdtivhmasllsavgeanpslalsvntrgiqnvlelakqyqlrvfapstiavfgpstpq
detpdttimrpttmygltkvhvellgeyyynkfgvdfrsvrypgvissealpgggttdya
veifyealkhgkytcflnrdaklpmmympdclkatmglinapndclsqrtynitavsftp
eeivasiqkvmpsfqcdykpdfrqqiaetwprsiddsiarkdwnwqhdfdldsmvedmlv
kldakl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6jygD (D:)
misatrlqravrpaarafsqsanpsrilvtggtgqigmelvpymrqlfgadtivnsdika
pggghrdgnfvycdvqdrdsmarivteqgvdtivhmasllsavgeanpslalsvntrgiq
nvlelakqyqlrvfapstiavfgpstpqdetpdttimrpttmygltkvhvellgeyyynk
fgvdfrsvrypgvissealpgggttdyaveifyealkhgkytcflnrdaklpmmympdcl
katmglinapndclsqrtynitavsftpeeivasiqkvmpsfqcdykpdfrqqiaetwpr
siddsiarkdwnwqhdfdldsmvedmlvkldaklskpeaaveeta

    Sequence, based on observed residues (ATOM records): (download) 
    >6jygD (D:)
srilvtggtgqigmelvpymrqlfgadtivnsdikapgrdgnfvycdvqdrdsmarivte
qgvdtivhmasllsavgeanpslalsvntrgiqnvlelakqyqlrvfapstiavfgpstp
qdetpdttimrpttmygltkvhvellgeyyynkfgvdfrsvrypgvissealpgggttdy
aveifyealkhgkytcflnrdaklpmmympdclkatmglinapndclsqrtynitavsft
peeivasiqkvmpsfqcdykpdfrqqiaetwprsiddsiarkdwnwqhdfdldsmvedml
vkldakl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6jygE (E:)
misatrlqravrpaarafsqsanpsrilvtggtgqigmelvpymrqlfgadtivnsdika
pggghrdgnfvycdvqdrdsmarivteqgvdtivhmasllsavgeanpslalsvntrgiq
nvlelakqyqlrvfapstiavfgpstpqdetpdttimrpttmygltkvhvellgeyyynk
fgvdfrsvrypgvissealpgggttdyaveifyealkhgkytcflnrdaklpmmympdcl
katmglinapndclsqrtynitavsftpeeivasiqkvmpsfqcdykpdfrqqiaetwpr
siddsiarkdwnwqhdfdldsmvedmlvkldaklskpeaaveeta

    Sequence, based on observed residues (ATOM records): (download) 
    >6jygE (E:)
srilvtggtgqigmelvpymrqlfgadtivnsdikapgdgnfvycdvqdrdsmarivteq
gvdtivhmasllsavgeanpslalsvntrgiqnvlelakqyqlrvfapstiavfgpstpq
detpdttimrpttmygltkvhvellgeyyynkfgvdfrsvrypgvissealpgggttdya
veifyealkhgkytcflnrdaklpmmympdclkatmglinapndclsqrtynitavsftp
eeivasiqkvmpsfqcdykpdfrqqiaetwprsiddsiarkdwnwqhdfdldsmvedmlv
klda

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6jygF (F:)
misatrlqravrpaarafsqsanpsrilvtggtgqigmelvpymrqlfgadtivnsdika
pggghrdgnfvycdvqdrdsmarivteqgvdtivhmasllsavgeanpslalsvntrgiq
nvlelakqyqlrvfapstiavfgpstpqdetpdttimrpttmygltkvhvellgeyyynk
fgvdfrsvrypgvissealpgggttdyaveifyealkhgkytcflnrdaklpmmympdcl
katmglinapndclsqrtynitavsftpeeivasiqkvmpsfqcdykpdfrqqiaetwpr
siddsiarkdwnwqhdfdldsmvedmlvkldaklskpeaaveeta

    Sequence, based on observed residues (ATOM records): (download) 
    >6jygF (F:)
srilvtggtgqigmelvpymrqlfgadtivnsdikapgrdgnfvycdvqdrdsmarivte
qgvdtivhmasllsavgeanpslalsvntrgiqnvlelakqyqlrvfapstiavfgpstp
qdetpdttimrpttmygltkvhvellgeyyynkfgvdfrsvrypgvissealpgggttdy
aveifyealkhgkytcflnrdaklpmmympdclkatmglinapndclsqrtynitavsft
peeivasiqkvmpsfqcdykpdfrqqiaetwprsiddsiarkdwnwqhdfdldsmvedml
vkldakl