PDB entry 6jul

View 6jul on RCSB PDB site
Description: msdpo4-dna complex 1
Deposited on 2019-04-15, released 2020-02-19
The last revision was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase IV
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: dinB, MSMEG_1014, MSMEG_2294
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (5'-d(p*cp*cp*tp*ap*gp*gp*ap*cp*cp*c)-3')
    Species: Escherichia coli, synthetic [TaxId:562]
  • Chain 'C':
    Compound: DNA (5'-d(p*cp*cp*tp*ap*gp*gp*ap*cp*cp*c)-3')
    Species: Escherichia coli, synthetic [TaxId:562]
  • Chain 'F':
    Compound: DNA polymerase IV
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: dinB, MSMEG_1014, MSMEG_2294
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: DNA (5'-d(p*cp*cp*tp*ap*gp*gp*ap*cp*cp*c)-3')
    Species: Escherichia coli, synthetic [TaxId:562]
  • Chain 'H':
    Compound: DNA (5'-d(p*cp*cp*tp*ap*gp*gp*ap*cp*cp*c)-3')
    Species: Escherichia coli, synthetic [TaxId:562]
  • Heterogens: 0KX, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6julA (A:)
mtkwvlhvdldqflasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhag
mplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesd
pvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrpp
dalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevsse
pwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtrvavtvrtstfytr
tkirklpapstdagqivdtalavldqfeldrpvrllgvrlelamddvprpavtagt

    Sequence, based on observed residues (ATOM records):
    >6julA (A:)
mtkwvlhvdldqflasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhag
mplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesd
pvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrpp
dalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevsse
pwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtrvavtvrtstfytr
tkirklpapstdagqivdtalavldqfeldrpvrllgvrlelamddv

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6julF (F:)
mtkwvlhvdldqflasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhag
mplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesd
pvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrpp
dalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevsse
pwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtrvavtvrtstfytr
tkirklpapstdagqivdtalavldqfeldrpvrllgvrlelamddvprpavtagt

    Sequence, based on observed residues (ATOM records):
    >6julF (F:)
mtkwvlhvdldqflasvelrrrpdlrgqpvivggsgdpseprkvvtcasyearefgvhag
mplraaarrcpdatflpsdpaaydeaseqvmgllrdlghplevwgwdeaylgadlpdesd
pvevaerirtvvaaetglscsvgisdnkqrakvatgfakpagiyvlteanwmtvmgdrpp
dalwgvgpkttkklaamgittvadlavtdpsvlttafgpstglwllllakgggdtevsse
pwvprsrshvvtfpqdlterremdsavrdlalqtlaeiveqgrivtrvavtvrtstfytr
tkirklpapstdagqivdtalavldqfeldrpvrllgvrlelamddv

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.