PDB entry 6jtp

View 6jtp on RCSB PDB site
Description: crystal structure of hla-c08 in complex with a tumor mut9m peptide
Deposited on 2019-04-11, released 2020-04-15
The last revision was dated 2021-02-17, with a file datestamp of 2021-02-12.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HLA class I antigen, Cw8.2 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-Cw, HLA-C
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: B2M, CDABP0092, HDCMA22P
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 9-mer peptide
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JTP (0-8)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6jtpA (A:)
shsmryfytavsrpgrgeprfiavgyvddtqfvqfdsdaasprgeprapwveqegpeywd
retqkykrqaqtdrvslrnlrgyynqseagshtlqrmygcdlgpdgrllrgynqfaydgk
dyialnedlrswtaadkaaqitqrkweaareaeqrraylegtcvewlrrylengkktlqr
aehpkthvthhpvsdheatlrcwalgfypaeitltwqrdgedqtqdtelvetrpagdgtf
qkwaavvvpsgeeqrytchvqheglpepltlrw

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6jtpB (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrd

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6jtpC (C:)
gadgvgksa