SCOPe 2.08: Structural Classification of Proteins

PDB entry 6jr8

View 6jr8 on RCSB PDB site
Description: flavobacterium johnsoniae gh31 dextranase, fjdex31a, mutant d412a complexed with isomaltotriose
Deposited on 2019-04-02, released 2019-04-24
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-02.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Candidate alpha-glycosidase Glycoside hydrolase family 31
Species: Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) [TaxId:376686]
Gene: Fjoh_4430
Database cross-references and differences (RAF-indexed):
- Uniprot A5FBI1 (Start-837)
  - engineered mutation (413)
Chain 'B':
Compound: Candidate alpha-glycosidase Glycoside hydrolase family 31
Species: Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) [TaxId:376686]
Gene: Fjoh_4430
Database cross-references and differences (RAF-indexed):
- Uniprot A5FBI1 (Start-837)
  - engineered mutation (413)
Chain 'C':
Compound: Candidate alpha-glycosidase Glycoside hydrolase family 31
Species: Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) [TaxId:376686]
Gene: Fjoh_4430
Database cross-references and differences (RAF-indexed):
- Uniprot A5FBI1 (Start-837)
  - engineered mutation (413)
Chain 'D':
Compound: Candidate alpha-glycosidase Glycoside hydrolase family 31
Species: Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) [TaxId:376686]
Gene: Fjoh_4430
Database cross-references and differences (RAF-indexed):
- Uniprot A5FBI1 (Start-837)
  - engineered mutation (413)
Heterogens: GLC, ACT, MPD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

Chain 'A':
Sequence, based on SEQRES records:

>6jr8A (A:)
mgsshhhhhhssglvprgshmasqkkeqylgnctaysvkgnkvvfscannskimlqlcsg
evvkiwasadgnfvrnnesfavieedlgwkgnvtvkeepstyeifteqlrirvnkapfql
qifdkyqkllfsdyaekgfvndngkirtnkvlrndeqffglgeksgnlnrrgsaykmwns
dqpcygvnedplyksipffmssyrygiffdntyktefkfgsesndyysfeapagqmvyyf
mfgndykeiiqnyialtgkpimppkwalgfsqcrgdytredqareiaaefrkrkipcdii
yqdigwteglqdfdwrknnynnpkgmvkdlsdmgfkmivsqdpvisqanqqqwkeadalg
hlvkdvrtgksydmpwpwggncgvvdftkpevadwwgsyqqkplndgvrgfwtamgepaw
snedavdrlnmkhhlgmhneihnvygftwdkvvteqfykhnpnkrifqmtraayaglqry
tfgwsgdsgngsnvldgwkqmanqipvglsagmglipfwtcdisgycgdikdydamaely
vrwlqfgvftplsrahheggnavepwkfgteaenisrksielkyklfpylytyareahdt
glpimrallleypndketfklngqflvgkellvapvveqgavtkdvylpegewidfnnck
tkykgeqwitvdaplntipvfvkkgsiipqmpvmqyidekkvypvtfdifpgnlnketsf
tfyeddgesrdyerdvfcktkitskasneeikitvgereykgyspagprnfilkihasnk
pkdvfaggeklknvkphvleknieadftkinwswneaenvisvripdsgknavitikn

Sequence, based on observed residues (ATOM records):

>6jr8A (A:)
eqylgnctaysvkgnkvvfscannskimlqlcsgevvkiwasadgnfvrnnesfavieed
lgwkgnvtvkeepstyeifteqlrirvnkapfqlqifdkyqkllfsdyaekgfvndngki
rtnkvlrndeqffglgeksgnlnrrgsaykmwnsdqpcygvnedplyksipffmssyryg
iffdntyktefkfgsesndyysfeapagqmvyyfmfgndykeiiqnyialtgkpimppkw
algfsqcrgdytredqareiaaefrkrkipcdiiyqdigwteglqdfdwrknnynnpkgm
vkdlsdmgfkmivsqdpvisqanqqqwkeadalghlvkdvrtgksydmpwpwggncgvvd
ftkpevadwwgsyqqkplndgvrgfwtamgepawsnedavdrlnmkhhlgmhneihnvyg
ftwdkvvteqfykhnpnkrifqmtraayaglqrytfgwsgdsgngsnvldgwkqmanqip
vglsagmglipfwtcdisgycgdikdydamaelyvrwlqfgvftplsrahheggnavepw
kfgteaenisrksielkyklfpylytyareahdtglpimrallleypndketfklngqfl
vgkellvapvveqgavtkdvylpegewidfnncktkykgeqwitvdaplntipvfvkkgs
iipqmpvmqyidekkvypvtfdifpgnlnketsftfyeddgesrdyerdvfcktkitska
sneeikitvgereykgyspagprnfilkihasnkpkdvfaggeklknvkphvlekniead
ftkinwswneaenvisvripdsgknavitikn

Chain 'B':
Sequence, based on SEQRES records:

>6jr8B (B:)
mgsshhhhhhssglvprgshmasqkkeqylgnctaysvkgnkvvfscannskimlqlcsg
evvkiwasadgnfvrnnesfavieedlgwkgnvtvkeepstyeifteqlrirvnkapfql
qifdkyqkllfsdyaekgfvndngkirtnkvlrndeqffglgeksgnlnrrgsaykmwns
dqpcygvnedplyksipffmssyrygiffdntyktefkfgsesndyysfeapagqmvyyf
mfgndykeiiqnyialtgkpimppkwalgfsqcrgdytredqareiaaefrkrkipcdii
yqdigwteglqdfdwrknnynnpkgmvkdlsdmgfkmivsqdpvisqanqqqwkeadalg
hlvkdvrtgksydmpwpwggncgvvdftkpevadwwgsyqqkplndgvrgfwtamgepaw
snedavdrlnmkhhlgmhneihnvygftwdkvvteqfykhnpnkrifqmtraayaglqry
tfgwsgdsgngsnvldgwkqmanqipvglsagmglipfwtcdisgycgdikdydamaely
vrwlqfgvftplsrahheggnavepwkfgteaenisrksielkyklfpylytyareahdt
glpimrallleypndketfklngqflvgkellvapvveqgavtkdvylpegewidfnnck
tkykgeqwitvdaplntipvfvkkgsiipqmpvmqyidekkvypvtfdifpgnlnketsf
tfyeddgesrdyerdvfcktkitskasneeikitvgereykgyspagprnfilkihasnk
pkdvfaggeklknvkphvleknieadftkinwswneaenvisvripdsgknavitikn

Sequence, based on observed residues (ATOM records):

>6jr8B (B:)
eqylgnctaysvkgnkvvfscannskimlqlcsgevvkiwasadgnfvrnnesfavieed
lgwkgnvtvkeepstyeifteqlrirvnkapfqlqifdkyqkllfsdyaekgfvndngki
rtnkvlrndeqffglgeksgnlnrrgsaykmwnsdqpcygvnedplyksipffmssyryg
iffdntyktefkfgsesndyysfeapagqmvyyfmfgndykeiiqnyialtgkpimppkw
algfsqcrgdytredqareiaaefrkrkipcdiiyqdigwteglqdfdwrknnynnpkgm
vkdlsdmgfkmivsqdpvisqanqqqwkeadalghlvkdvrtgksydmpwpwggncgvvd
ftkpevadwwgsyqqkplndgvrgfwtamgepawsnedavdrlnmkhhlgmhneihnvyg
ftwdkvvteqfykhnpnkrifqmtraayaglqrytfgwsgdsgngsnvldgwkqmanqip
vglsagmglipfwtcdisgycgdikdydamaelyvrwlqfgvftplsrahheggnavepw
kfgteaenisrksielkyklfpylytyareahdtglpimrallleypndketfklngqfl
vgkellvapvveqgavtkdvylpegewidfnncktkykgeqwitvdaplntipvfvkkgs
iipqmpvmqyidekkvypvtfdifpgnlnketsftfyeddgesrdyerdvfcktkitska
sneeikitvgereykgyspagprnfilkihasnkpkdvfaggeklknvkphvlekniead
ftkinwswneaenvisvripdsgknavitikn

Chain 'C':
Sequence, based on SEQRES records:

>6jr8C (C:)
mgsshhhhhhssglvprgshmasqkkeqylgnctaysvkgnkvvfscannskimlqlcsg
evvkiwasadgnfvrnnesfavieedlgwkgnvtvkeepstyeifteqlrirvnkapfql
qifdkyqkllfsdyaekgfvndngkirtnkvlrndeqffglgeksgnlnrrgsaykmwns
dqpcygvnedplyksipffmssyrygiffdntyktefkfgsesndyysfeapagqmvyyf
mfgndykeiiqnyialtgkpimppkwalgfsqcrgdytredqareiaaefrkrkipcdii
yqdigwteglqdfdwrknnynnpkgmvkdlsdmgfkmivsqdpvisqanqqqwkeadalg
hlvkdvrtgksydmpwpwggncgvvdftkpevadwwgsyqqkplndgvrgfwtamgepaw
snedavdrlnmkhhlgmhneihnvygftwdkvvteqfykhnpnkrifqmtraayaglqry
tfgwsgdsgngsnvldgwkqmanqipvglsagmglipfwtcdisgycgdikdydamaely
vrwlqfgvftplsrahheggnavepwkfgteaenisrksielkyklfpylytyareahdt
glpimrallleypndketfklngqflvgkellvapvveqgavtkdvylpegewidfnnck
tkykgeqwitvdaplntipvfvkkgsiipqmpvmqyidekkvypvtfdifpgnlnketsf
tfyeddgesrdyerdvfcktkitskasneeikitvgereykgyspagprnfilkihasnk
pkdvfaggeklknvkphvleknieadftkinwswneaenvisvripdsgknavitikn

Sequence, based on observed residues (ATOM records):

>6jr8C (C:)
eqylgnctaysvkgnkvvfscannskimlqlcsgevvkiwasadgnfvrnnesfavieed
lgwkgnvtvkeepstyeifteqlrirvnkapfqlqifdkyqkllfsdyaekgfvndngki
rtnkvlrndeqffglgeksgnlnrrgsaykmwnsdqpcygvnedplyksipffmssyryg
iffdntyktefkfgsesndyysfeapagqmvyyfmfgndykeiiqnyialtgkpimppkw
algfsqcrgdytredqareiaaefrkrkipcdiiyqdigwteglqdfdwrknnynnpkgm
vkdlsdmgfkmivsqdpvisqanqqqwkeadalghlvkdvrtgksydmpwpwggncgvvd
ftkpevadwwgsyqqkplndgvrgfwtamgepawsnedavdrlnmkhhlgmhneihnvyg
ftwdkvvteqfykhnpnkrifqmtraayaglqrytfgwsgdsgngsnvldgwkqmanqip
vglsagmglipfwtcdisgycgdikdydamaelyvrwlqfgvftplsrahheggnavepw
kfgteaenisrksielkyklfpylytyareahdtglpimrallleypndketfklngqfl
vgkellvapvveqgavtkdvylpegewidfnncktkykgeqwitvdaplntipvfvkkgs
iipqmpvmqyidekkvypvtfdifpgnlnketsftfyeddgesrdyerdvfcktkitska
sneeikitvgereykgyspagprnfilkihasnkpkdvfaggeklknvkphvlekniead
ftkinwswneaenvisvripdsgknavitikn

Chain 'D':
Sequence, based on SEQRES records:

>6jr8D (D:)
mgsshhhhhhssglvprgshmasqkkeqylgnctaysvkgnkvvfscannskimlqlcsg
evvkiwasadgnfvrnnesfavieedlgwkgnvtvkeepstyeifteqlrirvnkapfql
qifdkyqkllfsdyaekgfvndngkirtnkvlrndeqffglgeksgnlnrrgsaykmwns
dqpcygvnedplyksipffmssyrygiffdntyktefkfgsesndyysfeapagqmvyyf
mfgndykeiiqnyialtgkpimppkwalgfsqcrgdytredqareiaaefrkrkipcdii
yqdigwteglqdfdwrknnynnpkgmvkdlsdmgfkmivsqdpvisqanqqqwkeadalg
hlvkdvrtgksydmpwpwggncgvvdftkpevadwwgsyqqkplndgvrgfwtamgepaw
snedavdrlnmkhhlgmhneihnvygftwdkvvteqfykhnpnkrifqmtraayaglqry
tfgwsgdsgngsnvldgwkqmanqipvglsagmglipfwtcdisgycgdikdydamaely
vrwlqfgvftplsrahheggnavepwkfgteaenisrksielkyklfpylytyareahdt
glpimrallleypndketfklngqflvgkellvapvveqgavtkdvylpegewidfnnck
tkykgeqwitvdaplntipvfvkkgsiipqmpvmqyidekkvypvtfdifpgnlnketsf
tfyeddgesrdyerdvfcktkitskasneeikitvgereykgyspagprnfilkihasnk
pkdvfaggeklknvkphvleknieadftkinwswneaenvisvripdsgknavitikn

Sequence, based on observed residues (ATOM records):

>6jr8D (D:)
eqylgnctaysvkgnkvvfscannskimlqlcsgevvkiwasadgnfvrnnesfavieed
lgwkgnvtvkeepstyeifteqlrirvnkapfqlqifdkyqkllfsdyaekgfvndngki
rtnkvlrndeqffglgeksgnlnrrgsaykmwnsdqpcygvnedplyksipffmssyryg
iffdntyktefkfgsesndyysfeapagqmvyyfmfgndykeiiqnyialtgkpimppkw
algfsqcrgdytredqareiaaefrkrkipcdiiyqdigwteglqdfdwrknnynnpkgm
vkdlsdmgfkmivsqdpvisqanqqqwkeadalghlvkdvrtgksydmpwpwggncgvvd
ftkpevadwwgsyqqkplndgvrgfwtamgepawsnedavdrlnmkhhlgmhneihnvyg
ftwdkvvteqfykhnpnkrifqmtraayaglqrytfgwsgdsgngsnvldgwkqmanqip
vglsagmglipfwtcdisgycgdikdydamaelyvrwlqfgvftplsrahheggnavepw
kfgteaenisrksielkyklfpylytyareahdtglpimrallleypndketfklngqfl
vgkellvapvveqgavtkdvylpegewidfnncktkykgeqwitvdaplntipvfvkkgs
iipqmpvmqyidekkvypvtfdifpgnlnketsftfyeddgesrdyerdvfcktkitska
sneeikitvgereykgyspagprnfilkihasnkpkdvfaggeklknvkphvlekniead
ftkinwswneaenvisvripdsgknavitikn