PDB entry 6jqy

View 6jqy on RCSB PDB site
Description: crystal structure of n-terminal domain of vapb46 antitoxin from mycobacterium tuberculosis
Deposited on 2019-04-02, released 2020-04-08
The last revision was dated 2020-04-08, with a file datestamp of 2020-04-03.
Experiment type: XRAY
Resolution: 1.64 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Antitoxin VapB46
    Species: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) [TaxId:83331]
    Gene: vapB46, MT3493
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WF12 (0-43)
      • engineered mutation (12)
  • Chain 'B':
    Compound: Antitoxin VapB46
    Species: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) [TaxId:83331]
    Gene: vapB46, MT3493
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WF12 (Start-43)
      • engineered mutation (12)
  • Chain 'C':
    Compound: Antitoxin VapB46
    Species: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) [TaxId:83331]
    Gene: vapB46, MT3493
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WF12 (0-43)
      • engineered mutation (12)
  • Chain 'D':
    Compound: Antitoxin VapB46
    Species: Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) [TaxId:83331]
    Gene: vapB46, MT3493
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WF12 (0-End)
      • engineered mutation (12)
  • Heterogens: ACT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6jqyA (A:)
tmtsvgvralrqqasellrrveagetieitdrgrpvallsplpq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jqyB (B:)
tmtsvgvralrqqasellrrveagetieitdrgrpvallsplpq

    Sequence, based on observed residues (ATOM records):
    >6jqyB (B:)
mtsvgvralrqqasellrrveagetieitdrgrpvallsplpq

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6jqyC (C:)
tmtsvgvralrqqasellrrveagetieitdrgrpvallsplpq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jqyD (D:)
tmtsvgvralrqqasellrrveagetieitdrgrpvallsplpq

    Sequence, based on observed residues (ATOM records):
    >6jqyD (D:)
tmtsvgvralrqqasellrrveagetieitdrgrpvallsplp