PDB entry 6jqa

View 6jqa on RCSB PDB site
Description: crystal structure of phyllogen, a phyllody inducing effector protein of phytoplasma.
Deposited on 2019-03-29, released 2019-05-15
The last revision was dated 2019-05-29, with a file datestamp of 2019-05-24.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phytoplasmal effector causing phyllody 1
    Species: Onion yellows phytoplasma OY-W [TaxId:428984]
    Gene: PHYL1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Phytoplasmal effector causing phyllody 1
    Species: Onion yellows phytoplasma OY-W [TaxId:428984]
    Gene: PHYL1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Phytoplasmal effector causing phyllody 1
    Species: Onion yellows phytoplasma OY-W [TaxId:428984]
    Gene: PHYL1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Phytoplasmal effector causing phyllody 1
    Species: Onion yellows phytoplasma OY-W [TaxId:428984]
    Gene: PHYL1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: IOD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jqaA (A:)
mnkdiasasnnnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntlla
lkqnlenlihnqkeqlktyqkllktlndenn

    Sequence, based on observed residues (ATOM records):
    >6jqaA (A:)
sasnnnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntllalkqnle
nlihnqkeqlktyqkllktlndenn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jqaB (B:)
mnkdiasasnnnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntlla
lkqnlenlihnqkeqlktyqkllktlndenn

    Sequence, based on observed residues (ATOM records):
    >6jqaB (B:)
diasasnnnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntllalkq
nlenlihnqkeqlktyqkllktlndenn

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jqaC (C:)
mnkdiasasnnnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntlla
lkqnlenlihnqkeqlktyqkllktlndenn

    Sequence, based on observed residues (ATOM records):
    >6jqaC (C:)
nnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntllalkqnlenlih
nqkeqlktyqkllktlndenn

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jqaD (D:)
mnkdiasasnnnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntlla
lkqnlenlihnqkeqlktyqkllktlndenn

    Sequence, based on observed residues (ATOM records):
    >6jqaD (D:)
nnqnitnysieeniinlkykirknavkkintereiqqlsnndpnkntllalkqnlenlih
nqkeqlktyqkllktlndenn