PDB entry 6jpk

View 6jpk on RCSB PDB site
Description: Crystal structure of S. pombe aspartate aminotransferase
Class: transferase
Keywords: amino acid, aspartate, aminotransferase, PLP-dependent enzyme, pyridoxal 5'-phosphate dependent enzyme, vitamin B6 dependent enzyme, TRANSFERASE
Deposited on 2019-03-27, released 2019-09-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-09-11, with a file datestamp of 2019-09-06.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aspartate aminotransferase, cytoplasmic
    Species: Schizosaccharomyces pombe 972h- [TaxId:284812]
    Gene: aat2, SPAC10F6.13c
    Database cross-references and differences (RAF-indexed):
    • Uniprot O42652 (Start-408)
      • engineered mutation (152)
      • expression tag (409)
    Domains in SCOPe 2.08: d6jpka1, d6jpka2
  • Chain 'B':
    Compound: Aspartate aminotransferase, cytoplasmic
    Species: Schizosaccharomyces pombe 972h- [TaxId:284812]
    Gene: aat2, SPAC10F6.13c
    Database cross-references and differences (RAF-indexed):
    • Uniprot O42652 (Start-408)
      • engineered mutation (152)
    Domains in SCOPe 2.08: d6jpkb_
  • Heterogens: PO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jpkA (A:)
msdygfanieeakadaifklnaqyhqdedpkkvnmsvgayrddtgkpwilpavkkaskiv
eeqasfnheylpiaglprftkaaaevlfrpnphllsedrvasmqsvsgtganflaasfie
tfyvkhtgahvyisnptwpvhrtlweklgvtvetypywdaknrsfdyegmlstiksapeg
sifllhacahnptgidptreqwlsifesllsrkhlvvfdiayqgfasgdlnrdswalnef
vkynkdffvcqsfaknmglygertgcmhyvakdastknkvlsqlcivqrntisnppayga
riaaeilnspqlfaeweqdlktmssriiemrkrlrdslvalktpgswdhitqqigmfsft
gltpaqvqfcqeryhlyfsangrismaglnnsnvehvaqafnhavrelplehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jpkA (A:)
sdygfanieeakadaifklnaqyhqdedpkkvnmsvgayrddtgkpwilpavkkaskive
eqasfnheylpiaglprftkaaaevlfrpnphllsedrvasmqsvsgtganflaasfiet
fyvkhtgahvyisnptwpvhrtlweklgvtvetypywdaknrsfdyegmlstiksapegs
ifllhacahnptgidptreqwlsifesllsrkhlvvfdiayqgfasgdlnrdswalnefv
kynkdffvcqsfaknmglygertgcmhyvakdastknkvlsqlcivqrntisnppaygar
iaaeilnspqlfaeweqdlktmssriiemrkrlrdslvalktpgswdhitqqigmfsftg
ltpaqvqfcqeryhlyfsangrismaglnnsnvehvaqafnhavrelpl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jpkB (B:)
msdygfanieeakadaifklnaqyhqdedpkkvnmsvgayrddtgkpwilpavkkaskiv
eeqasfnheylpiaglprftkaaaevlfrpnphllsedrvasmqsvsgtganflaasfie
tfyvkhtgahvyisnptwpvhrtlweklgvtvetypywdaknrsfdyegmlstiksapeg
sifllhacahnptgidptreqwlsifesllsrkhlvvfdiayqgfasgdlnrdswalnef
vkynkdffvcqsfaknmglygertgcmhyvakdastknkvlsqlcivqrntisnppayga
riaaeilnspqlfaeweqdlktmssriiemrkrlrdslvalktpgswdhitqqigmfsft
gltpaqvqfcqeryhlyfsangrismaglnnsnvehvaqafnhavrelplehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jpkB (B:)
sdygfanieeakadaifklnaqyhqdedpkkvnmsvgayrddtgkpwilpavkkaskive
eqasfnheylpiaglprftkaaaevlfrpnphllsedrvasmqsvsgtganflaasfiet
fyvkhtgahvyisnptwpvhrtlweklgvtvetypywdaknrsfdyegmlstiksapegs
ifllhacahnptgidptreqwlsifesllsrkhlvvfdiayqgfasgdlnrdswalnefv
kynkdffvcqsfaknmglygertgcmhyvakdastknkvlsqlcivqrntisnppaygar
iaaeilnspqlfaeweqdlktmssriiemrkrlrdslvalktpgswdhitqqigmfsftg
ltpaqvqfcqeryhlyfsangrismaglnnsnvehvaqafnhavrelp