PDB entry 6jpi

View 6jpi on RCSB PDB site
Description: crystal structure of pa4674 in complex with its operator dna (28bp) from pseudomonas aeruginosa
Deposited on 2019-03-27, released 2020-04-01
The last revision was dated 2020-04-01, with a file datestamp of 2020-03-27.
Experiment type: XRAY
Resolution: 3.14 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: HTH cro/C1-type domain-containing protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: PA4674
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA (28-mer)
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]
  • Chain 'F':
    Compound: DNA (28-mer)
    Species: PSEUDOMONAS AERUGINOSA, synthetic [TaxId:287]

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jpiA (A:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6jpiA (A:)
mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdt
saqfwmnlqseyslatayaangkqieheiepl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jpiB (B:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6jpiB (B:)
mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdt
saqfwmnlqseyslatayaangkqieheiepll

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jpiC (C:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6jpiC (C:)
rpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdts
aqfwmnlqseyslatayaangkqieheiepl

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jpiD (D:)
matngmrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlg
ryfdtsaqfwmnlqseyslatayaangkqieheiepllahggshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6jpiD (D:)
mrpihpgeilrdeflmefdispaalaralkvsaptvndivreqrgisadmairlgryfdt
saqfwmnlqseyslatayaangkqieheiepll

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.