PDB entry 6jp2

View 6jp2 on RCSB PDB site
Description: crystal structure of pyrrolysyl-trna synthetase from methanomethylophilus alvus
Deposited on 2019-03-25, released 2019-05-22
The last revision was dated 2020-04-29, with a file datestamp of 2020-04-24.
Experiment type: XRAY
Resolution: 2.27 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus [TaxId:1291540]
    Database cross-references and differences (RAF-indexed):
    • Uniprot M9SC49 (3-277)
      • expression tag (1-2)
  • Chain 'B':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus [TaxId:1291540]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus [TaxId:1291540]
    Database cross-references and differences (RAF-indexed):
    • Uniprot M9SC49 (3-277)
      • expression tag (2)
  • Chain 'D':
    Compound: Pyrrolysyl-tRNA synthetase
    Species: Candidatus Methanomethylophilus alvus [TaxId:1291540]
    Database cross-references and differences (RAF-indexed):
    • Uniprot M9SC49 (3-277)
      • expression tag (2)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jp2A (A:)
gshmtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmian
psrhgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekral
rpmlapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdat
evlknyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhe
pwsgagfglerlltirekystvkkggasisylngakin

    Sequence, based on observed residues (ATOM records):
    >6jp2A (A:)
shmtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianp
srhgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralr
pmlapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdate
vlknyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhep
wsgagfglerlltirekystvkkggasisylngakin

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jp2B (B:)
gshmtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmian
psrhgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekral
rpmlapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdat
evlknyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhe
pwsgagfglerlltirekystvkkggasisylngakin

    Sequence, based on observed residues (ATOM records):
    >6jp2B (B:)
mtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianpsr
hgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpm
lapnlysvmrdlrdhtdgpvkifemgscfrkesmhleeftmlnlvdmgprgdatevlkny
isvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepwsgag
fglerlltirekystvkkggasisylngakin

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jp2C (C:)
gshmtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmian
psrhgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekral
rpmlapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdat
evlknyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhe
pwsgagfglerlltirekystvkkggasisylngakin

    Sequence, based on observed residues (ATOM records):
    >6jp2C (C:)
hmtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmianps
rhgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrp
mlapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatev
lknyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepw
sgagfglerlltirekystvkkggasisylngakin

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jp2D (D:)
gshmtvkytdaqiqrlreygngtyeqkvfedlasrdaafskemsvastdnekkikgmian
psrhgltqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekral
rpmlapnlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdat
evlknyisvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhe
pwsgagfglerlltirekystvkkggasisylngakin

    Sequence, based on observed residues (ATOM records):
    >6jp2D (D:)
hmtvkytdaqiqrlreygngtyeqkvfsrdaafskemsvastdnekkikgmianpsrhgl
tqlmndiadalvaegfievrtpifiskdalarmtitedkplfkqvfwidekralrpmlap
nlysvmrdlrdhtdgpvkifemgscfrkeshsgmhleeftmlnlvdmgprgdatevlkny
isvvmkaaglpdydlvqeesdvyketidveingqevcsaavgphyldaahdvhepwsgag
fglerlltirekystvkkggasisylngakin