PDB entry 6joo

View 6joo on RCSB PDB site
Description: crystal structure of corynebacterium diphtheriae cas9 in complex with sgrna and target dna
Deposited on 2019-03-22, released 2019-04-17
The last revision was dated 2019-05-15, with a file datestamp of 2019-05-10.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: CRISPR-associated protein,CRISPR-associated endonuclease Cas9
    Species: Corynebacterium diphtheriae NCTC 13129 [TaxId:257309]
    Gene: cas9
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Guide RNA
    Species: Corynebacterium diphtheriae, synthetic [TaxId:1717]
  • Chain 'C':
    Compound: Target DNA
    Species: Corynebacterium diphtheriae, synthetic [TaxId:1717]
  • Chain 'D':
    Compound: non-target DNA
    Species: Corynebacterium diphtheriae, synthetic [TaxId:1717]
  • Heterogens: EDO, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jooA (A:)
gshmkyhvgidvgtfsvglaaievddagmpiktlslvshihdsgldpdeiksavtrlass
giarrtrrlyrrkrrrlqqldkfiqrqgwpvieledysdplypwkvraelaasyiadeke
rgeklsvalrhiarhrgwrnpyakvsslylpdgpsdafkaireeikrasgqpvpetatvg
qmvtlcelgtlklrgeggvlsarlqqsdyareiqeicrmqeigqelyrkiidvvfaaesp
kgsassrvgkdplqpgknralkasdafqryriaalignlrvrvdgekrilsveeknlvfd
hlvnltpkkepewvtiaeilgidrgqligtatmtddgeragarppthdtnrsivnsriap
lvdwwktasaleqhamvkalsnaevddfdspegakvqaffadldddvhakldslhlpvgr
aaysedtlvrltrrmlsdgvdlytarlqefgiepswtpptprigepvgnpavdrvlktvs
rwlesatktwgaperviiehgggsggsmesvawmanelrsrvaqhfashgttvrvyrgsl
taearrasgisgklkffdgvgksrldrrhhaidaaviaftsdyvaetlavrsnlkqsqah
rqeapqwreftgkdaehraawrvwcqkmeklsalltedlrddrvvvmsnvrlrlgngsah
ketigklskvklssqlsvsdidkassealwcaltrepgfdpkeglpanperhirvngthv
yagdniglfpvsagsialrggyaelgssfhharvykitsgkkpafamlrvytidllpyrn
qdlfsvelkpqtmsmrqaekklrdalatgnaeylgwlvvddelvvdtskiatdqvkavea
elgtirrwrvdgffspsklrlrplqmskegikkesapelskiidrpgwlpavnklfsdgn
vtvvrrdslgrvrlestahlpvtwkvq

    Sequence, based on observed residues (ATOM records):
    >6jooA (A:)
shmkyhvgidvgtfsvglaaievddagmpiktlslvshihdsgldpdeiksavtrlassg
iarrtrrlyrrkrrrlqqldkfiqrqgwpvieledysdplypwkvraelaasyiadeker
geklsvalrhiarhrgwrnpyakvsslylpdgpsdafkaireeikrasgqpvpetatvgq
mvtlceklrgeggvlsarlqqsdyareiqeicrmqeigqelyrkiidvvfaaespkgsas
srvgkdplqpgknralkasdafqryriaalignveeknlvfdhlvnltparppthdtnrs
ivnsriaplvdwwktasaleqhamvkalsnaevddfdspegakvqaffadldddvhakld
slhlpvgraaysedtlvrltrrmlsdgytarlqefgiepswtpptprigepvgnpavdrv
lktvsrwlesatktwgaperviiehsvawmanelrsrvaqhfashgttvrvyrgsltaeg
klkffdgvgksrldrrhhaidaaviaftsdyvaetlavrsdaehraawrvwcqkmeklsa
lltedlrddrvvvmsnvrlrlgngsahketigklskvklssqlsvsdidkassealwcal
trepgfdpkeglpanperhirvngthvyagdniglfpvsagsialrggyaelgssfhhar
vykitsgkkpafamlrvytidllpyrnqdlfsvelkpqtmsmrqaekklrdalatgnaey
lgwlvvddelvvdtskiatdqvkaveaelgtirrwrvdgffspsklrlrplqmskegikk
esapelskiidrpgwlpavnklfsdgnvtvvrrdslgrvrlestahlpvtwkvq

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.