PDB entry 6jod

View 6jod on RCSB PDB site
Description: angiotensin ii type 2 receptor with ligand
Deposited on 2019-03-20, released 2020-01-15
The last revision was dated 2020-04-22, with a file datestamp of 2020-04-17.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Type-2 angiotensin II receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: AGTR2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50052 (0-End)
      • engineered mutation (173)
  • Chain 'B':
    Compound: Angiotensin II
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JOD (0-7)
  • Chain 'C':
    Compound: Soluble cytochrome b562,Soluble cytochrome b562
    Species: Escherichia coli [TaxId:562]
    Gene: cybC
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Heavy chain of 4A03Fab
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JOD (0-219)
  • Chain 'L':
    Compound: Light chain of 4A03Fab
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JOD (0-211)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jodA (A:)
csqkpsdkhldaipilyyiifvigflvnivvvtlfccqkgpkkvssiyifnlavadllll
atlplwatyysyrydwlfgpvmckvfgsfltlnmfasiffitcmsvdryqsviypflsqr
rnpwqasyivplvwcmaclsslptfyfrdvrtieylgvnacimafppekyaqwaagialm
knilgfiiplifiatcyfgirkhllktnsygknritrdqvlkmaaavvlafiicwlpfhv
ltfldalawmgvinsceviavidlalpfaillgftnscvnpflycfvgnrfqqklrsvfr
vpitwlqgkres

    Sequence, based on observed residues (ATOM records):
    >6jodA (A:)
csqkpsdkhldaipilyyiifvigflvnivvvtlfccqkgpkkvssiyifnlavadllll
atlplwatyysyrydwlfgpvmckvfgsfltlnmfasiffitcmsvdryqsviypflsqr
rnpwqasyivplvwcmaclsslptfyfrdvrtieylgvnacimafppekyaqwaagialm
knilgfiiplifiatcyfgirkhllktnsygknritrdqvlkmaaavvlafiicwlpfhv
ltfldalawmgvinsceviavidlalpfaillgftnscvnpflycfvgnrfqqklrsvfr
vpitwl

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6jodB (B:)
drvyihpf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jodC (C:)
adlednwetlndnlkviekadnaaqvkdaltkmraaaldagsgsgdilvgqiddalklan
egkvkeaqaaaeqlkttinayiqkyg

    Sequence, based on observed residues (ATOM records):
    >6jodC (C:)
etlndnlkviekadnaaqvkdaltkmraaaldilvgqiddalklanegkvkeaqaaaeq

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6jodH (H:)
dvqlvesggglvqpggsrklscaasgftfsgfgmhwvrqapekglewvayissgssliyy
adtvkgrftisrdnpkntlflqmtslrsedtamyfcatslyygtpwfaywgqgtlvtvsa
akttppsvyplapgcgdttgssvtlgclvkgyfpesvtvtwnsgslsssvhtfpallqsg
lytmsssvtvpsstwpsqtvtcsvahpassttvdkkleps

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6jodL (L:)
divltqspaimsaspgekvtmtcsasssvtymywyqqkpgssprlliydtsnlasgvpvr
fsgsgsgtsysltisrmeaedaatfycqqwssypltfgagtklelkradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltl
tkdeyerhnsytceathktstspivksfnrne