PDB entry 6jnu

View 6jnu on RCSB PDB site
Description: Catalase structure determined by eEFD (dataset 2)
Class: oxidoreductase
Keywords: Electron 3D crystallography, eEFD, energy filter, ParallEM, CRYO ARM, OXIDOREDUCTASE
Deposited on 2019-03-18, released 2019-04-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-22, with a file datestamp of 2019-05-17.
Experiment type: ELECTRONCRYSTALLOGRAPHY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: catalase
    Species: Bos taurus [TaxId:9913]
    Gene: cat
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jnua_
  • Chain 'B':
    Compound: catalase
    Species: Bos taurus [TaxId:9913]
    Gene: cat
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jnub_
  • Chain 'C':
    Compound: catalase
    Species: Bos taurus [TaxId:9913]
    Gene: cat
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jnuc_
  • Chain 'D':
    Compound: catalase
    Species: Bos taurus [TaxId:9913]
    Gene: cat
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jnud_
  • Heterogens: HEM, NDP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jnuA (A:)
madnrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftde
mahfdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvages
gsadtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpd
mvwdfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdq
giknlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdlt
kvwphgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypd
thrhrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsale
hrthfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavk
nfsdvhpeygsriqalldkyneekpknavhtyvqhgshlsarekanl

    Sequence, based on observed residues (ATOM records): (download) 
    >6jnuA (A:)
nrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftdemah
fdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvagesgsa
dtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpdmvw
dfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdqgik
nlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdltkvw
phgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypdthr
hrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsalehrt
hfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavknfs
dvhpeygsriqalldkyne

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jnuB (B:)
madnrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftde
mahfdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvages
gsadtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpd
mvwdfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdq
giknlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdlt
kvwphgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypd
thrhrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsale
hrthfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavk
nfsdvhpeygsriqalldkyneekpknavhtyvqhgshlsarekanl

    Sequence, based on observed residues (ATOM records): (download) 
    >6jnuB (B:)
nrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftdemah
fdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvagesgsa
dtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpdmvw
dfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdqgik
nlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdltkvw
phgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypdthr
hrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsalehrt
hfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavknfs
dvhpeygsriqalldkyne

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6jnuC (C:)
madnrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftde
mahfdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvages
gsadtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpd
mvwdfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdq
giknlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdlt
kvwphgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypd
thrhrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsale
hrthfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavk
nfsdvhpeygsriqalldkyneekpknavhtyvqhgshlsarekanl

    Sequence, based on observed residues (ATOM records): (download) 
    >6jnuC (C:)
nrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftdemah
fdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvagesgsa
dtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpdmvw
dfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdqgik
nlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdltkvw
phgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypdthr
hrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsalehrt
hfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavknfs
dvhpeygsriqalldkyne

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6jnuD (D:)
madnrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftde
mahfdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvages
gsadtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpd
mvwdfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdq
giknlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdlt
kvwphgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypd
thrhrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsale
hrthfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavk
nfsdvhpeygsriqalldkyneekpknavhtyvqhgshlsarekanl

    Sequence, based on observed residues (ATOM records): (download) 
    >6jnuD (D:)
nrdpasdqmkhwkeqraaqkpdvlttgggnpvgdklnsltvgprgpllvqdvvftdemah
fdreripervvhakgagafgyfevthditryskakvfehigkrtpiavrfstvagesgsa
dtvrdprgfavkfytedgnwdlvgnntpiffirdallfpsfihsqkrnpqthlkdpdmvw
dfwslrpeslhqvsflfsdrgipdghrhmngygshtfklvnangeavyckfhyktdqgik
nlsvedaarlahedpdyglrdlfnaiatgnypswtlyiqvmtfseaeifpfnpfdltkvw
phgdyplipvgklvlnrnpvnyfaeveqlafdpsnmppgiepspdkmlqgrlfaypdthr
hrlgpnylqipvncpyrarvanyqrdgpmcmmdnqggapnyypnsfsapehqpsalehrt
hfsgdvqrfnsanddnvtqvrtfylkvlneeqrkrlceniaghlkdaqlfiqkkavknfs
dvhpeygsriqalldkyne