PDB entry 6jnk

View 6jnk on RCSB PDB site
Description: crystal structure of azospirillum brasilense l-arabinose 1- dehydrogenase (nadp-bound form)
Deposited on 2019-03-16, released 2019-05-15
The last revision was dated 2019-06-26, with a file datestamp of 2019-06-21.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-arabinose 1-dehydrogenase (NAD(P)(+))
    Species: AZOSPIRILLUM BRASILENSE [TaxId:192]
    Gene: araA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: L-arabinose 1-dehydrogenase (NAD(P)(+))
    Species: AZOSPIRILLUM BRASILENSE [TaxId:192]
    Gene: araA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: L-arabinose 1-dehydrogenase (NAD(P)(+))
    Species: AZOSPIRILLUM BRASILENSE [TaxId:192]
    Gene: araA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: L-arabinose 1-dehydrogenase (NAD(P)(+))
    Species: AZOSPIRILLUM BRASILENSE [TaxId:192]
    Gene: araA
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAP, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jnkA (A:)
gpsdqvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaer
eldavslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwh
srcasaveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivt
rilprelvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtad
gvlaisrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfg
rrvqtdafgr

    Sequence, based on observed residues (ATOM records):
    >6jnkA (A:)
qvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaerelda
vslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwhsrca
saveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivtrilp
relvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtadgvla
isrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfgrrvq
tdafgr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jnkB (B:)
gpsdqvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaer
eldavslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwh
srcasaveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivt
rilprelvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtad
gvlaisrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfg
rrvqtdafgr

    Sequence, based on observed residues (ATOM records):
    >6jnkB (B:)
qvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaerelda
vslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwhsrca
saveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivtrilp
relvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtadgvla
isrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfgrrvq
tdafgr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jnkC (C:)
gpsdqvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaer
eldavslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwh
srcasaveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivt
rilprelvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtad
gvlaisrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfg
rrvqtdafgr

    Sequence, based on observed residues (ATOM records):
    >6jnkC (C:)
qvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaerelda
vslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwhsrca
saveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivtrilp
relvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtadgvla
isrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfgrrvq
tdafgr

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jnkD (D:)
gpsdqvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaer
eldavslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwh
srcasaveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivt
rilprelvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtad
gvlaisrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfg
rrvqtdafgr

    Sequence, based on observed residues (ATOM records):
    >6jnkD (D:)
qvslgvvgigkiardqhlpaidaepgfkltacasrhaevtgvrnyrdlrallaaerelda
vslcappqvryaqaraaleagkhvmlekppgatlgevavlealarergltlfatwhsrca
saveparewlatrairavqvrwkedvrrwhpgqqwiwepgglgvfdpginalsivtrilp
relvlreatlivpsdvqtpiaaeldcadtdgvpvraefdwrhgpveqweiavdtadgvla
isrggaqlsiagepvelgpereypalyahfhaliargesdvdvrplrlvadaflfgrrvq
tdafgr