PDB entry 6jni

View 6jni on RCSB PDB site
Description: crystal structure of the transcriptional regulator cadr from p. putida in complex with zinc(ii) and dna
Deposited on 2019-03-16, released 2019-09-25
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: CadR
    Species: Pseudomonas putida [TaxId:303]
    Gene: cadR, BIW19_10095, BL240_26950
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Chain 'J':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Chain 'K':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Chain 'L':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Chain 'M':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Chain 'N':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Chain 'O':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Chain 'P':
    Compound: DNA (25-mer)
    Species: PSEUDOMONAS PUTIDA, synthetic [TaxId:303]
  • Heterogens: ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jniA (A:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniA (A:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrsh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jniB (B:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniB (B:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrccailqqle
tngavs

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jniC (C:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniC (C:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrccailqqle
tngavsvp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jniD (D:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniD (D:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrsh

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6jniE (E:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniE (E:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspcgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecailq
qletngavshshvgrsh

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6jniF (F:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniF (F:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrccailqqle
tngavsvp

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6jniG (G:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniG (G:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrccailqqle
tngavsvpe

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6jniH (H:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspddscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaeca
ilqqletngavsvpetehshvgrshgh

    Sequence, based on observed residues (ATOM records):
    >6jniH (H:)
mkigelakatdcavetiryyereqllpeparsdgnyrlytqahverltfirncrtldmtl
deirsllrlrdspscgsvnalidehiehvqaridglvalqeqlvelrrrcnaqgaecail
qqletngavsshvgrsh

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.

  • Chain 'M':
    No sequence available.

  • Chain 'N':
    No sequence available.

  • Chain 'O':
    No sequence available.

  • Chain 'P':
    No sequence available.