PDB entry 6jmp

View 6jmp on RCSB PDB site
Description: Crystal Structure of a Non-hemolytic Pneumolysin from Streptococcus pneumoniae strain ST306
Class: toxin
Keywords: Cholesterol Dependent Cytolysin, Toxin, Pneumolysin, Non-pore forming, Non-hemolytic, Membrane
Deposited on 2019-03-13, released 2020-09-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-24, with a file datestamp of 2021-02-19.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thiol-activated cytolysin
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: ply
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jmpa_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6jmpA (A:)
mankavndfilamnydkkkllthqgesienrfikegnqlpdefvvierkkrslstntsdi
svtatndsrlypgallvvdetllennptllavdrapmtysidlpglassdsflqvedpsn
ssvrgavndllakwhqdygqvnnvparmqhekitahsmeqlkvkfgsdfekignsldidf
nsvhsgekqiqivnfkqiyytvsvdavknpgdvfqdtvtvedlrqrgisaerplvyissv
aygrqvylklettsksdeveaafeslikgvapqtewkqildntevkavilggdpssgarv
vtgkvdmvedliqegsrftadhpglpisyttsflrdnvvatfqnstdyvetkvtayrngd
llldhsgayvaqyyitwdelsydhqgkevltpkawdrngqdltahfttsiplkgnvrnls
vkirectglawewwrtvyektdlplvrkrtisiwgttlypqvedkvend