PDB entry 6jl2

View 6jl2 on RCSB PDB site
Description: crystal structure of vvplpa g389n from vibrio vulnificus
Deposited on 2019-03-03, released 2019-05-15
The last revision was dated 2019-08-14, with a file datestamp of 2019-08-09.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thermolabile hemolysin
    Species: Vibrio vulnificus [TaxId:672]
    Gene: CRN61_10355
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2S3SYP4 (Start-417)
      • engineered mutation (389)
      • expression tag (418-423)
  • Chain 'B':
    Compound: Thermolabile hemolysin
    Species: Vibrio vulnificus [TaxId:672]
    Gene: CRN61_10355
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2S3SYP4 (Start-417)
      • engineered mutation (389)
      • expression tag (418)
  • Chain 'C':
    Compound: Thermolabile hemolysin
    Species: Vibrio vulnificus [TaxId:672]
    Gene: CRN61_10355
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2S3SYP4 (Start-417)
      • engineered mutation (389)
      • expression tag (418)
  • Heterogens: P6G, 1PS, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jl2A (A:)
mgkkitillgallpftsavadepalspeaitsaqvfstqsketytyvrcwyrtgnshdes
atdwewaenpdgsyftidgywwssvrlknmfytntsqnvikqrceetlgvthdaadityf
aadnrwsynhtiwtndpvmqadqinkivafgdslsdtgnifnaaqwrfpnpdtwflghfs
ngfvwteyiaqakklplynwavggaagsnqyvaltgvkdqvlsyltyakmaknykpentl
ftlefglndfmnynrevvdvktdfstalikltdagaknimlmtlpdatkapqfkystqae
iekvrakivefnefikaqaafyiiqgynitlydthglfeqltqnpqqhgfvnasdaclni
nrassadylyshsltnecathssdkyvfwnvthpttavhkyiaekmlapgagmqrfnfhh
hhhh

    Sequence, based on observed residues (ATOM records):
    >6jl2A (A:)
alspeaitsaqvfstqsketytyvrcwyrtgnshdesatdwewaenpdgsyftidgywws
svrlknmfytntsqnvikqrceetlgvthdaadityfaadnrwsynhtiwtndpvmqadq
inkivafgdslsdtgnifnaaqwrfpnpdtwflghfsngfvwteyiaqakklplynwavg
gaagsnqyvaltgvkdqvlsyltyakmaknykpentlftlefglndfmnynrevvdvktd
fstalikltdagaknimlmtlpdatkapqfkystqaeiekvrakivefnefikaqaafyi
iqgynitlydthglfeqltqnpqqhgfvnasdaclninrassadylyshsltnecathss
dkyvfwnvthpttavhkyiaekmlapgagmqrfnfhhhhhh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jl2B (B:)
mgkkitillgallpftsavadepalspeaitsaqvfstqsketytyvrcwyrtgnshdes
atdwewaenpdgsyftidgywwssvrlknmfytntsqnvikqrceetlgvthdaadityf
aadnrwsynhtiwtndpvmqadqinkivafgdslsdtgnifnaaqwrfpnpdtwflghfs
ngfvwteyiaqakklplynwavggaagsnqyvaltgvkdqvlsyltyakmaknykpentl
ftlefglndfmnynrevvdvktdfstalikltdagaknimlmtlpdatkapqfkystqae
iekvrakivefnefikaqaafyiiqgynitlydthglfeqltqnpqqhgfvnasdaclni
nrassadylyshsltnecathssdkyvfwnvthpttavhkyiaekmlapgagmqrfnfhh
hhhh

    Sequence, based on observed residues (ATOM records):
    >6jl2B (B:)
speaitsaqvfstqsketytyvrcwyrtgnshdesatdwewaenpdgsyftidgywwssv
rlknmfytntsqnvikqrceetlgvthdaadityfaadnrwsynhtiwtndpvmqadqin
kivafgdslsdtgnifnaaqwrfpnpdtwflghfsngfvwteyiaqakklplynwavgga
agsnqyvaltgvkdqvlsyltyakmaknykpentlftlefglndfmnynrevvdvktdfs
talikltdagaknimlmtlpdatkapqfkystqaeiekvrakivefnefikaqaafyiiq
gynitlydthglfeqltqnpqqhgfvnasdaclninsadylyshsltnecathssdkyvf
wnvthpttavhkyiaekmlapgagmqrfnfh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jl2C (C:)
mgkkitillgallpftsavadepalspeaitsaqvfstqsketytyvrcwyrtgnshdes
atdwewaenpdgsyftidgywwssvrlknmfytntsqnvikqrceetlgvthdaadityf
aadnrwsynhtiwtndpvmqadqinkivafgdslsdtgnifnaaqwrfpnpdtwflghfs
ngfvwteyiaqakklplynwavggaagsnqyvaltgvkdqvlsyltyakmaknykpentl
ftlefglndfmnynrevvdvktdfstalikltdagaknimlmtlpdatkapqfkystqae
iekvrakivefnefikaqaafyiiqgynitlydthglfeqltqnpqqhgfvnasdaclni
nrassadylyshsltnecathssdkyvfwnvthpttavhkyiaekmlapgagmqrfnfhh
hhhh

    Sequence, based on observed residues (ATOM records):
    >6jl2C (C:)
speaitsaqvfstqsketytyvrcwyrtgnshdesatdwewaenpdgsyftidgywwlkn
mfytntsqnvikqrceetlgvthdaadityfaadnrwsynhtiwtndpvmqadqinkiva
fgdslsdtgnifnaaqwrfpnpdtwflghfsngfvwteyiaqakklplynwavggaagsn
qyvaltgvkdqvlsyltyakmaknykpentlftlefglndfmnynrevvdvktdfstali
kltdagaknimlmtlpdatkapqfkystqaeiekvrakivefnefikaqaafyiiqgyni
tlydthglfeqltqnpqqhgfvnasdaclnisadylyshsltnecathssdkyvfwnvth
pttavhkyiaekmlapgagmqrfnfh