PDB entry 6jku

View 6jku on RCSB PDB site
Description: crystal structure of n-acetylglucosamine-6-phosphate deacetylase from pasteurella multocida
Deposited on 2019-03-01, released 2020-03-04
The last revision was dated 2021-03-17, with a file datestamp of 2021-03-12.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: N-acetylglucosamine-6-phosphate deacetylase
    Species: Pasteurella multocida [TaxId:747]
    Gene: BGK37_09560
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1E3XI56 (17-394)
      • expression tag (10-16)
  • Chain 'B':
    Compound: N-acetylglucosamine-6-phosphate deacetylase
    Species: Pasteurella multocida [TaxId:747]
    Gene: BGK37_09560
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1E3XI56 (17-394)
      • expression tag (10-16)
  • Chain 'C':
    Compound: N-acetylglucosamine-6-phosphate deacetylase
    Species: Pasteurella multocida [TaxId:747]
    Gene: BGK37_09560
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1E3XI56 (17-394)
      • expression tag (15-16)
  • Chain 'D':
    Compound: N-acetylglucosamine-6-phosphate deacetylase
    Species: Pasteurella multocida [TaxId:747]
    Gene: BGK37_09560
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, PO4, EDO, GOL, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jkuA (A:)
mhhhhhhitslykkagfmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqk
idlqgnnltagfidlqlngcggvmfnedisvktleimqetnlksgttsylptfitspdeg
mkdavkvmreyltqyknqalglhfegpylsvekkgvhreeyiraispemktflcdnadvi
tkitlaaenptaqyipdfvekgiivslghsnatydvaqqaiekgasfathlhnamspiss
gramgvvgavldsdiytgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfv
fvgktvyvrdgkcydsngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvd
hklgsievgkianltaftndfnvlgtavngewkan

    Sequence, based on observed residues (ATOM records):
    >6jkuA (A:)
lykkagfmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqkidlqgnnlta
gfidlqlngcggvmfnedisvktleimqetnlksgttsylptfitspdegmkdavkvmre
yltqyknqalglhfegpylsvekkgvhreeyiraispemktflcdnadvitkitlaaenp
taqyipdfvekgiivslghsnatydvaqqaiekgasfathlhnamspissgramgvvgav
ldsdiytgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfvfvgktvyvrd
gkcydsngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvdhklgsievgk
ianltaftndfnvlgtavngewkan

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jkuB (B:)
mhhhhhhitslykkagfmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqk
idlqgnnltagfidlqlngcggvmfnedisvktleimqetnlksgttsylptfitspdeg
mkdavkvmreyltqyknqalglhfegpylsvekkgvhreeyiraispemktflcdnadvi
tkitlaaenptaqyipdfvekgiivslghsnatydvaqqaiekgasfathlhnamspiss
gramgvvgavldsdiytgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfv
fvgktvyvrdgkcydsngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvd
hklgsievgkianltaftndfnvlgtavngewkan

    Sequence, based on observed residues (ATOM records):
    >6jkuB (B:)
lykkagfmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqkidlqgnnlta
gfidlqlngcggvmfnedisvktleimqetnlksgttsylptfitspdegmkdavkvmre
yltqyknqalglhfegpylsvekkgvhreeyiraispemktflcdnadvitkitlaaenp
taqyipdfvekgiivslghsnatydvaqqaiekgasfathlhnamspissgramgvvgav
ldsdiytgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfvfvgktvyvrd
gkcydsngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvdhklgsievgk
ianltaftndfnvlgtavngewkan

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jkuC (C:)
mhhhhhhitslykkagfmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqk
idlqgnnltagfidlqlngcggvmfnedisvktleimqetnlksgttsylptfitspdeg
mkdavkvmreyltqyknqalglhfegpylsvekkgvhreeyiraispemktflcdnadvi
tkitlaaenptaqyipdfvekgiivslghsnatydvaqqaiekgasfathlhnamspiss
gramgvvgavldsdiytgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfv
fvgktvyvrdgkcydsngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvd
hklgsievgkianltaftndfnvlgtavngewkan

    Sequence, based on observed residues (ATOM records):
    >6jkuC (C:)
gfmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqkidlqgnnltagfidl
qlngcggvmfnedisvktleimqetnlksgttsylptfitspdegmkdavkvmreyltqy
knqalglhfegpylsvekkgvhreeyiraispemktflcdnadvitkitlaaenptaqyi
pdfvekgiivslghsnatydvaqqaiekgasfathlhnamspissgramgvvgavldsdi
ytgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfvfvgktvyvrdgkcyd
sngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvdhklgsievgkianlt
aftndfnvlgtavngewkan

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jkuD (D:)
mhhhhhhitslykkagfmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqk
idlqgnnltagfidlqlngcggvmfnedisvktleimqetnlksgttsylptfitspdeg
mkdavkvmreyltqyknqalglhfegpylsvekkgvhreeyiraispemktflcdnadvi
tkitlaaenptaqyipdfvekgiivslghsnatydvaqqaiekgasfathlhnamspiss
gramgvvgavldsdiytgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfv
fvgktvyvrdgkcydsngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvd
hklgsievgkianltaftndfnvlgtavngewkan

    Sequence, based on observed residues (ATOM records):
    >6jkuD (D:)
fmyafvnaviytakdvlygkalvvdgdkisailpvedvpenlqkidlqgnnltagfidlq
lngcggvmfnedisvktleimqetnlksgttsylptfitspdegmkdavkvmreyltqyk
nqalglhfegpylsvekkgvhreeyiraispemktflcdnadvitkitlaaenptaqyip
dfvekgiivslghsnatydvaqqaiekgasfathlhnamspissgramgvvgavldsdiy
tgiivdglhvdygnirldkkvkgdklcivtdataaagadidsfvfvgktvyvrdgkcyds
ngtlggaaitmiesvknavqevgipldetlrmcnyypakaigvdhklgsievgkianlta
ftndfnvlgtavngewkan