PDB entry 6jkp

View 6jkp on RCSB PDB site
Description: crystal structure of sulfoacetaldehyde reductase from bifidobacterium kashiwanohense in complex with nad+
Deposited on 2019-03-01, released 2019-06-12
The last revision was dated 2019-07-03, with a file datestamp of 2019-06-28.
Experiment type: XRAY
Resolution: 3.01 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: methanol dehydrogenase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00250
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: methanol dehydrogenase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00250
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: methanol dehydrogenase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00250
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: methanol dehydrogenase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00250
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAD, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jkpA (A:)
sngggmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasd
gavstvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsia
dyhgtgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdp
eltysvppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephne
earekmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqh
grvqefargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynn
pveitddmldtmyhylastd

    Sequence, based on observed residues (ATOM records):
    >6jkpA (A:)
gmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasdgavs
tvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsiadyhg
tgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdpelty
svppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephneeare
kmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqhgrvq
efargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynnpvei
tddmldtmyhylastd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jkpB (B:)
sngggmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasd
gavstvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsia
dyhgtgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdp
eltysvppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephne
earekmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqh
grvqefargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynn
pveitddmldtmyhylastd

    Sequence, based on observed residues (ATOM records):
    >6jkpB (B:)
gmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasdgavs
tvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsiadyhg
tgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdpelty
svppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephneeare
kmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqhgrvq
efargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynnpvei
tddmldtmyhylastd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jkpC (C:)
sngggmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasd
gavstvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsia
dyhgtgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdp
eltysvppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephne
earekmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqh
grvqefargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynn
pveitddmldtmyhylastd

    Sequence, based on observed residues (ATOM records):
    >6jkpC (C:)
gmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasdgavs
tvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsiadyhg
tgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdpelty
svppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephneeare
kmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqhgrvq
efargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynnpvei
tddmldtmyhylastd

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jkpD (D:)
sngggmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasd
gavstvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsia
dyhgtgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdp
eltysvppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephne
earekmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqh
grvqefargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynn
pveitddmldtmyhylastd

    Sequence, based on observed residues (ATOM records):
    >6jkpD (D:)
gmlwdyaqpvtirfgkgrameikdiaeamglhdgimvtpkffvdsgeaqrlidasdgavs
tvftdfspnpdvtevdacaeiirknhcefvvamgggsamdvskaaasicltddsiadyhg
tgkampqkhlpiialpttagtgsevtcvsvltnrklgkkapivsdgffpsvaivdpelty
svppkitastgmdvlsqaiegfwskghqpicdscaahaaklvfkylpiavaephneeare
kmceasviaglaftlpkttsshacsfpltnihgiphgeacgltldyfarinkdaqhgrvq
efargigfkdvdamadaihdlkvrigmrtglkdlnlteeqiadlvrisrhpnlynnpvei
tddmldtmyhylastd