PDB entry 6jkj

View 6jkj on RCSB PDB site
Description: Crystal structure of human SPSB2 in the apo-state
Class: protein binding
Keywords: E3 ubiquitin ligase, SPRY domain-containing SOCS box protein, SPSB2, PROTEIN BINDING
Deposited on 2019-03-01, released 2019-07-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-03, with a file datestamp of 2019-06-28.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SPRY domain-containing SOCS box protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: SPSB2, GRCC9, SSB2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q99619 (Start-200)
      • expression tag (201)
    Domains in SCOPe 2.08: d6jkja1, d6jkja2
  • Chain 'B':
    Compound: SPRY domain-containing SOCS box protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: SPSB2, GRCC9, SSB2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q99619 (Start-200)
      • expression tag (201-208)
    Domains in SCOPe 2.08: d6jkjb1, d6jkjb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jkjA (A:)
mgdlscpegleellsapppdlgaqrrhgwnpkdcsenievkegglyferrpvaqstdgar
gkrgysrglhaweiswpleqrgthavvgvatalaplqtdhyaallgsnseswgwdigrgk
lyhqskgpgapqypagtqgeqlevperllvvldmeegtlgyaiggtylgpafrglkgrtl
ypavsavwgqcqvrirylgergshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jkjA (A:)
lscpegleellsapppdlgaqrrhgwnpkdcsenievkegglyferrpvaqstdgargkr
gysrglhaweiswpleqrgthavvgvatalaplqtdhyaallgsnseswgwdigrgklyh
qskapqypagtqgeqlevperllvvldmeegtlgyaiggtylgpafrglkgrtlypavsa
vwgqcqvrirylgerg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jkjB (B:)
mgdlscpegleellsapppdlgaqrrhgwnpkdcsenievkegglyferrpvaqstdgar
gkrgysrglhaweiswpleqrgthavvgvatalaplqtdhyaallgsnseswgwdigrgk
lyhqskgpgapqypagtqgeqlevperllvvldmeegtlgyaiggtylgpafrglkgrtl
ypavsavwgqcqvrirylgergshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jkjB (B:)
pegleellsapppdlgaqrrhgwnpkdcsenievkegglyferrpvaqstdgargkrgys
rglhaweiswpleqrgthavvgvatalaplqtdhyaallgsnseswgwdigrgklyhqsk
apqypagtqeqlevperllvvldmeegtlgyaiggtylgpafrglkgrtlypavsavwgq
cqvrirylgergshhhhhh