PDB entry 6jkc

View 6jkc on RCSB PDB site
Description: crystal structure of tetrameric peptso2 in p4212 space group
Deposited on 2019-02-28, released 2019-05-15
The last revision was dated 2019-05-15, with a file datestamp of 2019-05-10.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Proton:oligopeptide symporter POT family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_1277
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jkcA (A:)
    mtlgtnqvskthsfmtvslielwerfgyygmqalivyfmvqrlgfddsranlvwsacaal
    iyvspaiggwvgdkilgtkrtmllgagilsvgyalmtvptentwfmfsalgvivvgnglf
    kpnagnlvrkiyegddskidsaftiyymavnvgstfsmlltpwikdyvnaqygnefgwha
    afavccvgilvglgnyalmhkslanygsepdtrpvnkkslaivlalaalsvvasaiiley
    edvarvfvyaagvavlgiffhlirtsepseragliaaliltvqtvfffifyqqmstslal
    falrnvdwdfqvfgthlwtwspaqfqalnpiwimvlspvlawsyswagrnnkdfsiaakf
    algfavvaigffiygfagqfavngktsswvmiwgyasyslgellvsglglamiaryvpar
    mggfmmgayfvasgisqylggvvanfasvpqdlvdplqtlpvytnlfnklgvaavvctii
    alavlplmrrlteshhahssiennaaaslrdvkaeqlessgenlyfq
    

    Sequence, based on observed residues (ATOM records):
    >6jkcA (A:)
    vskthsfmtvslielwerfgyygmqalivyfmvqrlgfddsranlvwsacaaliyvspai
    ggwvgdkilgtkrtmllgagilsvgyalmtvptentwfmfsalgvivvgnglfkpnagnl
    vrkiyeskidsaftiyymavnvgstfsmlltpwikdyvnaqygnefgwhaafavccvgil
    vglgnyalmhkslanygsepdtrpvnkkslaivlalaalsvvasaiileyedvarvfvya
    agvavlgiffhlirtseragliaaliltvqtvfffifyqqmstslalfalrnvdwdfqvf
    gthlwtwspaqfqalnpiwimvlspvlawsysiaakfalgfavvaigffiygfagqfavn
    gktsswvmiwgyasyslgellvsglglamimggfmmgayfvasgisqylggvvanfasvp
    qdlvdplqtlpvytnlfnklgvaavvctiialavlplmrrlt