PDB entry 6jka

View 6jka on RCSB PDB site
Description: Crystal structure of metallo-beta-lactamse, IMP-1, in complex with a thiazole-bearing inhibitor
Class: hydrolase
Keywords: hydrolase
Deposited on 2019-02-28, released 2020-03-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-03-25, with a file datestamp of 2020-03-20.
Experiment type: XRAY
Resolution: 2.01 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Metallo-beta-lactamase type 2
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52699 (5-End)
      • expression tag (0-4)
    Domains in SCOPe 2.08: d6jkaa1, d6jkaa2
  • Chain 'B':
    Compound: Metallo-beta-lactamase type 2
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jkab_
  • Chain 'C':
    Compound: Metallo-beta-lactamase type 2
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52699 (5-227)
      • expression tag (0-4)
    Domains in SCOPe 2.08: d6jkac1, d6jkac2
  • Chain 'D':
    Compound: Metallo-beta-lactamase type 2
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jkad_
  • Heterogens: ZN, BS0, BQU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jkaA (A:)
gpgvgeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdt
eklvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatn
sfsgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieaw
pksakllkskygkaklvvpshsevgdasllkltleqavkglneskkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6jkaA (A:)
gpgvgeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdt
eklvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatn
sfsgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieaw
pksakllkskygkaklvvpshsevgdasllkltleqavkglneskkp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jkaB (B:)
gpgvgeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdt
eklvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatn
sfsgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieaw
pksakllkskygkaklvvpshsevgdasllkltleqavkglneskkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6jkaB (B:)
slpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdteklvtw
fvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsfsgvn
ywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpksakl
lkskygkaklvvpshsevgdasllkltleqavkglneskk

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6jkaC (C:)
gpgvgeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdt
eklvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatn
sfsgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieaw
pksakllkskygkaklvvpshsevgdasllkltleqavkglneskkps

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6jkaD (D:)
gpgvgeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdt
eklvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatn
sfsgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieaw
pksakllkskygkaklvvpshsevgdasllkltleqavkglneskkps

    Sequence, based on observed residues (ATOM records): (download) 
    >6jkaD (D:)
lpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdteklvtwf
vergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsfsgvny
wlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpksakll
kskygkaklvvpshsevgdasllkltleqavkglneskkp