PDB entry 6jix

View 6jix on RCSB PDB site
Description: The cyrstal structure of taurine:2-oxoglutarate aminotransferase from Bifidobacterium kashiwanohense, in complex with PLP and glutamate
Class: transferase
Keywords: aminotransferase, pyridoxal 5' phosphate, glutamate, 2-oxoglutarate, TRANSFERASE
Deposited on 2019-02-23, released 2020-01-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: taurine:2-oxoglutarate aminotransferase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jixa_
  • Chain 'B':
    Compound: taurine:2-oxoglutarate aminotransferase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jixb_
  • Chain 'C':
    Compound: taurine:2-oxoglutarate aminotransferase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jixc_
  • Chain 'D':
    Compound: taurine:2-oxoglutarate aminotransferase
    Species: Bifidobacterium kashiwanohense PV20-2 [TaxId:1447716]
    Gene: AH68_00255
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jixd_
  • Heterogens: GGL, PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jixA (A:)
snmeeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsn
lghelpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsn
enaikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmy
edgytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvra
lcdkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskris
dyftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkc
vgearciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicp
pliitaeqleeelpkldkvltwvdenlcd

    Sequence, based on observed residues (ATOM records): (download) 
    >6jixA (A:)
meeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsnlg
helpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsnen
aikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmyed
gytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvralc
dkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskrisdy
ftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkcvg
earciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicppl
iitaeqleeelpkldkvltwvdenlcd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jixB (B:)
snmeeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsn
lghelpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsn
enaikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmy
edgytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvra
lcdkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskris
dyftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkc
vgearciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicp
pliitaeqleeelpkldkvltwvdenlcd

    Sequence, based on observed residues (ATOM records): (download) 
    >6jixB (B:)
meeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsnlg
helpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsnen
aikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmyed
gytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvralc
dkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskrisdy
ftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkcvg
earciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicppl
iitaeqleeelpkldkvltwvdenlc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6jixC (C:)
snmeeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsn
lghelpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsn
enaikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmy
edgytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvra
lcdkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskris
dyftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkc
vgearciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicp
pliitaeqleeelpkldkvltwvdenlcd

    Sequence, based on observed residues (ATOM records): (download) 
    >6jixC (C:)
meeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsnlg
helpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsnen
aikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmyed
gytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvralc
dkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskrisdy
ftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkcvg
earciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicppl
iitaeqleeelpkldkvltwvdenlc

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6jixD (D:)
snmeeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsn
lghelpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsn
enaikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmy
edgytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvra
lcdkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskris
dyftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkc
vgearciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicp
pliitaeqleeelpkldkvltwvdenlcd

    Sequence, based on observed residues (ATOM records): (download) 
    >6jixD (D:)
meeltgeevaslhseyvmqswhkqggpvkpikkadgiyfwdydgkrytdmssllvcsnlg
helpeivdaikeqadnmcfmapayasepksrlakmlvdvadpdfyqrvfftnggadsnen
aikmarmvtgrpkifscyrsyhgstigasnasgdwrrfatelggsapgfvhfmnpnmyed
gytrgvddatvtadylhrldeqlqyegpdsvaailmesivgangvilppegymegvralc
dkygilmicdevmagfgrtgkmfawqnfdvkpdmftfakgvtcgyvplggvvvskrisdy
ftdhvlqcgltysghtlacaagvaavnyylehdvcahvkemegilkpflesmvekhkcvg
earciglfsaltivknketrelmapyhtpnsvmpqimaklmdlgfstfgretninicppl
iitaeqleeelpkldkvltwvdenlc