PDB entry 6jiv

View 6jiv on RCSB PDB site
Description: sspe crystal structure
Deposited on 2019-02-23, released 2020-03-25
The last revision was dated 2020-07-08, with a file datestamp of 2020-07-03.
Experiment type: XRAY
Resolution: 3.31 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SspE protein
    Species: Streptomyces yokosukanensis [TaxId:67386]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JIV (0-End)
  • Chain 'B':
    Compound: SspE protein
    Species: Streptomyces yokosukanensis [TaxId:67386]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JIV (0-End)
  • Chain 'C':
    Compound: SspE protein
    Species: Streptomyces yokosukanensis [TaxId:67386]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JIV (0-End)
  • Chain 'D':
    Compound: SspE protein
    Species: Streptomyces yokosukanensis [TaxId:67386]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JIV (0-End)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jivA (A:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesygayardpdavkpyrhvpidpdktdgvdleayrhldrmrdqmrsmlrkavg
agvkreddiqlptgtdigqsqnlqfalfnsefppsvveqleddakmtpltrlivfanyll
hrvtvavvtakredygfdmfealnttgqpltaietfkpraikeegldewqesesklhfdv
veayldregsssadkrqtvtssvllpfamfqdgtkltkrlndqrrylrtvfdkdpdivar
rkvlaglaqvarfyegpwgsptkvpscddatlrtqagialaalregghdivvglltryfa
ahrlsspetvessarqfllaarscaafyalwrgsfgstagidgvyrslmthvveegmprf
arferdltevppvealqsylkeqlrsegiydkqqwvaraamtpvyqhskpltrllllaas
qnstpdsatpglvvrgksglletlelerwndeafatiehvapqapssngswnadlyedpe
linrignltllpavenasasnrawhlkrlmfralsaatveeaektladaeaqglrlgsga
geivrqarylplvaalaqreeewtaefvearsqrlcslawdaltpwlgfep

    Sequence, based on observed residues (ATOM records):
    >6jivA (A:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesyvdleayrhldrmrdqmrsmlrkavgagvkreddiqlptgtdigqsqnlqf
alfnsefppsvveqleddakmtpltrlivfanyllhrvtvavvtakredygfdmfealnt
tgqpltaietfkpraikeegldewqesesklhfdvveayldregadkrqtvtssvllpfa
mfqdgtkltkrlndqrrylrtvfdkdpdivarrkvlaglaqvarfyegpwgsptkvpscd
datlrtqagialaalregghdivvglltryfaahrlsspetvessarqfllaarscaafy
alwrgsfgstagidgvyrslmthvveegealqsylkeqlrsegiydkqqwvaraamtpvy
qhskpltrllllaasqnstp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jivB (B:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesygayardpdavkpyrhvpidpdktdgvdleayrhldrmrdqmrsmlrkavg
agvkreddiqlptgtdigqsqnlqfalfnsefppsvveqleddakmtpltrlivfanyll
hrvtvavvtakredygfdmfealnttgqpltaietfkpraikeegldewqesesklhfdv
veayldregsssadkrqtvtssvllpfamfqdgtkltkrlndqrrylrtvfdkdpdivar
rkvlaglaqvarfyegpwgsptkvpscddatlrtqagialaalregghdivvglltryfa
ahrlsspetvessarqfllaarscaafyalwrgsfgstagidgvyrslmthvveegmprf
arferdltevppvealqsylkeqlrsegiydkqqwvaraamtpvyqhskpltrllllaas
qnstpdsatpglvvrgksglletlelerwndeafatiehvapqapssngswnadlyedpe
linrignltllpavenasasnrawhlkrlmfralsaatveeaektladaeaqglrlgsga
geivrqarylplvaalaqreeewtaefvearsqrlcslawdaltpwlgfep

    Sequence, based on observed residues (ATOM records):
    >6jivB (B:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesyvdleayrhldrmrdqmrsmlrkavgagvkreddiqlptgtdigqsqnlqf
alfnsefppsvveqleddakmtpltrlivfanyllhrvtvavvtakredygfdmfealnt
tgqpltaietfkpraikeegldewqesesklhfdvveayldregadkrqtvtssvllpfa
mfqdgtkltkrlndqrrylrtvfdkdpdivarrkvlaglaqvarfyegpwgsptkvpscd
datlrtqagialaalregghdivvglltryfaahrlsspetvessarqfllaarscaafy
alwrgsfgstagidgvyrslmthvveegealqsylkeqlrsegiydkqqwvaraamtpvy
qhskpltrllllaasqnstp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jivC (C:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesygayardpdavkpyrhvpidpdktdgvdleayrhldrmrdqmrsmlrkavg
agvkreddiqlptgtdigqsqnlqfalfnsefppsvveqleddakmtpltrlivfanyll
hrvtvavvtakredygfdmfealnttgqpltaietfkpraikeegldewqesesklhfdv
veayldregsssadkrqtvtssvllpfamfqdgtkltkrlndqrrylrtvfdkdpdivar
rkvlaglaqvarfyegpwgsptkvpscddatlrtqagialaalregghdivvglltryfa
ahrlsspetvessarqfllaarscaafyalwrgsfgstagidgvyrslmthvveegmprf
arferdltevppvealqsylkeqlrsegiydkqqwvaraamtpvyqhskpltrllllaas
qnstpdsatpglvvrgksglletlelerwndeafatiehvapqapssngswnadlyedpe
linrignltllpavenasasnrawhlkrlmfralsaatveeaektladaeaqglrlgsga
geivrqarylplvaalaqreeewtaefvearsqrlcslawdaltpwlgfep

    Sequence, based on observed residues (ATOM records):
    >6jivC (C:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesyvdleayrhldrmrdqmrsmlrkavgagvkreddiqlptgtdigqsqnlqf
alfnsefppsvveqleddakmtpltrlivfanyllhrvtvavvtakredygfdmfealnt
tgqpltaietfkpraikeegldewqesesklhfdvveayldregadkrqtvtssvllpfa
mfqdgtkltkrlndqrrylrtvfdkdpdivarrkvlaglaqvarfyegpwgsptkvpscd
datlrtqagialaalregghdivvglltryfaahrlsspetvessarqfllaarscaafy
alwrgsfgstagidgvyrslmthvvealqsylkeqlrsegiydkqqwvaraamtpvyqhs
kpltrllllaasqnstp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jivD (D:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesygayardpdavkpyrhvpidpdktdgvdleayrhldrmrdqmrsmlrkavg
agvkreddiqlptgtdigqsqnlqfalfnsefppsvveqleddakmtpltrlivfanyll
hrvtvavvtakredygfdmfealnttgqpltaietfkpraikeegldewqesesklhfdv
veayldregsssadkrqtvtssvllpfamfqdgtkltkrlndqrrylrtvfdkdpdivar
rkvlaglaqvarfyegpwgsptkvpscddatlrtqagialaalregghdivvglltryfa
ahrlsspetvessarqfllaarscaafyalwrgsfgstagidgvyrslmthvveegmprf
arferdltevppvealqsylkeqlrsegiydkqqwvaraamtpvyqhskpltrllllaas
qnstpdsatpglvvrgksglletlelerwndeafatiehvapqapssngswnadlyedpe
linrignltllpavenasasnrawhlkrlmfralsaatveeaektladaeaqglrlgsga
geivrqarylplvaalaqreeewtaefvearsqrlcslawdaltpwlgfep

    Sequence, based on observed residues (ATOM records):
    >6jivD (D:)
metkeifdaaplsvsqflsetgqglyippyqrayswelpkirrllsdvahgldqlaefed
sicflgtvialrdinyttvepkyrsqvpskvmtiidgqqrmttllllttvlheeirvrae
kltrddepsvwcynqaldvtgrlsncfeedmrygehryyprlirsyydvwsrnkgearyr
spigyylesyvdleayrhldrmrdqmrsmlrkavgagvkreddiqlptgtdigqsqnlqf
alfnsefppsvveqleddakmtpltrlivfanyllhrvtvavvtakredygfdmfealnt
tgqpltaietfkpraikeegldewqesesklhfdvveayldregadkrqtvtssvllpfa
mfqdgtkltkrlndqrrylrtvfdkdpdivarrkvlaglaqvarfyegpwgsptkvpscd
datlrtqagialaalregghdivvglltryfaahrlsspetvessarqfllaarscaafy
alwrgsfgstagidgvyrslmthvveegealqsylkeqlrsegiydkqqwvaraamtpvy
qhskpltrllllaasqnstp