PDB entry 6jij

View 6jij on RCSB PDB site
Description: the crystal structure of main protease from mouse hepatitis virus a59 in complex with an inhibitor
Deposited on 2019-02-21, released 2019-04-24
The last revision was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Replicative polyprotein 1ab
    Species: Murine coronavirus (strain A59) [TaxId:11142]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66WN6 (0-End)
      • conflict (281)
  • Chain 'B':
    Compound: Replicative polyprotein 1ab
    Species: Murine coronavirus (strain A59) [TaxId:11142]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66WN6 (0-End)
      • conflict (281)
  • Chain 'C':
    Compound: Replicative polyprotein 1ab
    Species: Murine coronavirus (strain A59) [TaxId:11142]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q66WN6 (0-End)
      • conflict (281)
  • Chain 'D':
    Compound: 02j-ala-val-leu-pje-010
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JIJ (0-5)
  • Chain 'E':
    Compound: 02j-ala-val-leu-pje-010
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JIJ (0-5)
  • Chain 'F':
    Compound: 02j-ala-val-leu-pje-010
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JIJ (0-5)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jijA (A:)
sgivkmvsptskvepcivsvtygnmtlnglwlddkvycprhvicsdmtdpdypnllcrvt
ssdfcvmsgrmsltvmsyqmqgcqlvltvtlqnpntpkysfgvvkpgetftvlaayngrp
qgafhvtlrsshtikgsflcgscgsvgyvltgdsvrfvymhqlelstgchtgtdfsgnfy
gpyrdaqvvqlpvqdytqtvnvvawlyaaifnrcnwfvqsdscsleefnvwamtngfssi
kadlvldalasmtgvtveqvlaaikrlhsgfqgkqilgscvfedeltpsdvyqqlagvkl
q

    Sequence, based on observed residues (ATOM records):
    >6jijA (A:)
sgivkmvsptskvepcivsvtygnmtlnglwlddkvycprhvicsdmtdpdypnllcrvt
ssdfcvmsgrmsltvmsyqmqgcqlvltvtlqnpntpkysfgvvkpgetftvlaayngrp
qgafhvtlrsshtikgsflcgscgsvgyvltgdsvrfvymhqlelstgchtgtdfsgnfy
gpyrdaqvvqlpvqdytqtvnvvawlyaaifnrcnwfvqsdscsleefnvwamtngfssi
kadlvldalasmtgvtveqvlaaikrlhsgfqgkqilgscvfedeltpsdvyqqlag

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jijB (B:)
sgivkmvsptskvepcivsvtygnmtlnglwlddkvycprhvicsdmtdpdypnllcrvt
ssdfcvmsgrmsltvmsyqmqgcqlvltvtlqnpntpkysfgvvkpgetftvlaayngrp
qgafhvtlrsshtikgsflcgscgsvgyvltgdsvrfvymhqlelstgchtgtdfsgnfy
gpyrdaqvvqlpvqdytqtvnvvawlyaaifnrcnwfvqsdscsleefnvwamtngfssi
kadlvldalasmtgvtveqvlaaikrlhsgfqgkqilgscvfedeltpsdvyqqlagvkl
q

    Sequence, based on observed residues (ATOM records):
    >6jijB (B:)
sgivkmvsptskvepcivsvtygnmtlnglwlddkvycprhvicsdmtdpdypnllcrvt
ssdfcvmsgrmsltvmsyqmqgcqlvltvtlqnpntpkysfgvvkpgetftvlaayngrp
qgafhvtlrsshtikgsflcgscgsvgyvltgdsvrfvymhqlelstgchtgtdfsgnfy
gpyrdaqvvqlpvqdytqtvnvvawlyaaifnrcnwfvqsdscsleefnvwamtngfssi
kadlvldalasmtgvtveqvlaaikrlhsgfqgkqilgscvfedeltpsdvyqqlag

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jijC (C:)
sgivkmvsptskvepcivsvtygnmtlnglwlddkvycprhvicsdmtdpdypnllcrvt
ssdfcvmsgrmsltvmsyqmqgcqlvltvtlqnpntpkysfgvvkpgetftvlaayngrp
qgafhvtlrsshtikgsflcgscgsvgyvltgdsvrfvymhqlelstgchtgtdfsgnfy
gpyrdaqvvqlpvqdytqtvnvvawlyaaifnrcnwfvqsdscsleefnvwamtngfssi
kadlvldalasmtgvtveqvlaaikrlhsgfqgkqilgscvfedeltpsdvyqqlagvkl
q

    Sequence, based on observed residues (ATOM records):
    >6jijC (C:)
sgivkmvsptskvepcivsvtygnmtlnglwlddkvycprhvicsdmtdpdypnllcrvt
ssdfcvmsgrmsltvmsyqmqgcqlvltvtlqnpntpkysfgvvkpgetftvlaayngrp
qgafhvtlrsshtikgsflcgscgsvgyvltgdsvrfvymhqlelstgchtgtdfsgnfy
gpyrdaqvvqlpvqdytqtvnvvawlyaaifnrcnwfvqsdscsleefnvwamtngfssi
kadlvldalasmtgvtveqvlaaikrlhsgfqgkqilgscvfedeltpsdvyqqlagv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6jijD (D:)
xavlxx

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6jijE (E:)
xavlxx

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6jijF (F:)
xavlxx