PDB entry 6jho

View 6jho on RCSB PDB site
Description: the complex crystal structure of cagbeta with cagz revealed a novel regulatory mechanism for t4ss coupling atpase in helicobacter pylori
Deposited on 2019-02-18, released 2020-02-19
The last revision was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cag pathogenicity island protein (Cag6)
    Species: Helicobacter pylori 26695 [TaxId:85962]
    Gene: HP_0526
    Database cross-references and differences (RAF-indexed):
    • Uniprot O25261 (10-207)
      • expression tag (8-9)
  • Chain 'B':
    Compound: Cag pathogenicity island protein (Cag6)
    Species: Helicobacter pylori 26695 [TaxId:85962]
    Gene: HP_0526
    Database cross-references and differences (RAF-indexed):
    • Uniprot O25261 (10-207)
      • expression tag (8-9)
  • Chain 'C':
    Compound: Cag pathogenicity island protein (Cag5)
    Species: Helicobacter pylori 26695 [TaxId:85962]
    Gene: HP_0524
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Cag pathogenicity island protein (Cag5)
    Species: Helicobacter pylori 26695 [TaxId:85962]
    Gene: HP_0524
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jhoA (A:)
gtssmadigselgfneaerqkildsnsslmgnanevrdkfiqnyasslkdsndpqdflrr
vqelrinmqknfisfdvyynylnnlvlasynrckqektfaestikneltlgefvaeisdn
fnnfmcdevarisdlvasylpreylppfidgnmmgvafqilgiddfgrklneivqdigtk
yiilsknktyltsleraklitqlklnle

    Sequence, based on observed residues (ATOM records):
    >6jhoA (A:)
gselgfneaerqkildsnsslmgnanevrdkfiqnyasslkdsndpqdflrrvqelrinm
qknfisfdvyynylnnlvlasynrckqektfaestikneltlgefvaeisdnfnnfmcde
varisdlvasylpreylppfidgnmmgvafqilgiddfgrklneivqdigtkyiilsknk
tyltsleraklitqlklnle

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jhoB (B:)
gtssmadigselgfneaerqkildsnsslmgnanevrdkfiqnyasslkdsndpqdflrr
vqelrinmqknfisfdvyynylnnlvlasynrckqektfaestikneltlgefvaeisdn
fnnfmcdevarisdlvasylpreylppfidgnmmgvafqilgiddfgrklneivqdigtk
yiilsknktyltsleraklitqlklnle

    Sequence, based on observed residues (ATOM records):
    >6jhoB (B:)
gselgfneaerqkildsnsslmgnanevrdkfiqnyasslkdsndpqdflrrvqelrinm
qknfisfdvyynylnnlvlasynrckqektfaestikneltlgefvaeisdnfnnfmcde
varisdlvasylpreylppfidgnmmgvafqilgiddfgrklneivqdigtkyiilsknk
tyltsleraklitqlklnle

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jhoC (C:)
gtssmadigsepfslkthrfnpfayvdfgndvvltedilsqidtrlkghgmvasggdfst
qifglaklvfperpnekdpffsnqarnlfvincniyrdlmwtkkglefvkrkkiimpetp
tmffigsmasginlidedtnmekvvslmeffggeedksgdnlrvlspatrnmwnsfktmg
garetyssvqgvytsafapynnamirnfts

    Sequence, based on observed residues (ATOM records):
    >6jhoC (C:)
rfnpfayvdfgndvvltedilsqimvasggdfstqifglaklvfperpnekdpffsnqar
nlfvincniyrdlmwtkkglefvkrkkiimpetptmffigsmasginlidedtnmekvvs
lmeffggeedksgdnlrvlspatrnmwnsfktmggaretyssvqgvytsafapyn

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jhoD (D:)
gtssmadigsepfslkthrfnpfayvdfgndvvltedilsqidtrlkghgmvasggdfst
qifglaklvfperpnekdpffsnqarnlfvincniyrdlmwtkkglefvkrkkiimpetp
tmffigsmasginlidedtnmekvvslmeffggeedksgdnlrvlspatrnmwnsfktmg
garetyssvqgvytsafapynnamirnfts

    Sequence, based on observed residues (ATOM records):
    >6jhoD (D:)
rfnpfayvdfgndvvltedilsqimvasggdfstqifglaklvfperpnekdpffsnqar
nlfvincniyrdlmwtkkglefvkrkkiimpetptmffigsmasginlidedtnmekvvs
lmeffggeedksgdnlrvlspatrnmwnsfktmggaretyssvqgvytsafapy