PDB entry 6jfw

View 6jfw on RCSB PDB site
Description: Crystal structure of PA0833 periplasmic domain from Pseudomonas aeruginosa reveals an unexpected enlarged peptidoglycan binding pocket
Class: membrane protein
Keywords: Pseudomonas aeruginosa, OmpA C-like protein, PA0833, PGN-binding basis, MEMBRANE PROTEIN
Deposited on 2019-02-12, released 2019-03-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-10, with a file datestamp of 2019-04-05.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PA0833-PD protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Gene: PA0833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9I5A7 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6jfwa1, d6jfwa2
  • Chain 'B':
    Compound: PA0833-PD protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Gene: PA0833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9I5A7 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6jfwb1, d6jfwb2
  • Chain 'C':
    Compound: PA0833-PD protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Gene: PA0833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9I5A7 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6jfwc1, d6jfwc2
  • Chain 'D':
    Compound: PA0833-PD protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Gene: PA0833
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9I5A7 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6jfwd1, d6jfwd2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jfwA (A:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvpgaqgpaqtqpqyghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jfwA (A:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jfwB (B:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvpgaqgpaqtqpqyghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jfwB (B:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6jfwC (C:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvpgaqgpaqtqpqyghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jfwC (C:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6jfwD (D:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvpgaqgpaqtqpqyghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6jfwD (D:)
gsdkqeaelrrqmegtgvevqrqgddiklimpgnitfatdsaniapsfyaplnnlansfk
qynqntieivgytdstgsrqhnmdlsqrraqsvagyltaqgvdgtrlstrgmgpdqpias
nstadgraqnrrvevnlrpvp