PDB entry 6jf6

View 6jf6 on RCSB PDB site
Description: met-ala-ser bound crystal structure of class i type b peptide deformylase from acinetobacter baumannii
Deposited on 2019-02-08, released 2020-02-12
The last revision was dated 2020-02-12, with a file datestamp of 2020-02-07.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptide deformylase
    Species: ACINETOBACTER BAUMANNII [TaxId:470]
    Gene: def, C3415_07350, IX87_00730
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Peptide deformylase
    Species: ACINETOBACTER BAUMANNII [TaxId:470]
    Gene: def, C3415_07350, IX87_00730
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Peptide deformylase
    Species: ACINETOBACTER BAUMANNII [TaxId:470]
    Gene: def, C3415_07350, IX87_00730
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Peptide deformylase
    Species: ACINETOBACTER BAUMANNII [TaxId:470]
    Gene: def, C3415_07350, IX87_00730
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: met-ala-ser
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JF6 (0-2)
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jf6A (A:)
msvvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyisk
rviivasrpnprypdapemnavvmvnpeilefssemclgeegclsvpdergqveraemvk
vkyltlqgemvetvfqgfparivqhevdhlngilfveris

    Sequence, based on observed residues (ATOM records):
    >6jf6A (A:)
msvvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyisk
rviivasrpnprypdapemnavvmvnpeilefssemclgeegclsvpdergqveraemvk
vkyltlqgemvetvfqgfparivqhevdhlngilfveri

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jf6B (B:)
msvvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyisk
rviivasrpnprypdapemnavvmvnpeilefssemclgeegclsvpdergqveraemvk
vkyltlqgemvetvfqgfparivqhevdhlngilfveris

    Sequence, based on observed residues (ATOM records):
    >6jf6B (B:)
msvvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyisk
rviivasrpnprypdapemnavvmvnpeilefssemclgeegclsvpdergqveraemvk
vkyltlqgemvetvfqgfparivqhevdhlngilfveri

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jf6C (C:)
msvvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyisk
rviivasrpnprypdapemnavvmvnpeilefssemclgeegclsvpdergqveraemvk
vkyltlqgemvetvfqgfparivqhevdhlngilfveris

    Sequence, based on observed residues (ATOM records):
    >6jf6C (C:)
msvvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyisk
rviivasrpnprypdapemnavvmvnpeilefssemclgeegclsvpdergqveraemvk
vkyltlqgemvetvfqgfparivqhevdhlngilfveri

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jf6D (D:)
msvvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyisk
rviivasrpnprypdapemnavvmvnpeilefssemclgeegclsvpdergqveraemvk
vkyltlqgemvetvfqgfparivqhevdhlngilfveris

    Sequence, based on observed residues (ATOM records):
    >6jf6D (D:)
svvlpvakrgedilkliaapvsanelnsnwlyqladamhatmlerngvgiaapqvyiskr
viivasrpnppdapemnavvmvnpeilefssemclgeegclsvpergqveraemvkvkyl
tlqgemvetvfqgfparivqhevdhlngilfver

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6jf6E (E:)
mas