PDB entry 6jdz

View 6jdz on RCSB PDB site
Description: Ligand complex structure of GH10 family xylanase XynAF1, soaking for 20 minutes
Class: hydrolase
Keywords: GH10 family, Thermophbilic, HYDROLASE
Deposited on 2019-02-02, released 2020-05-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-02.
Experiment type: XRAY
Resolution: 1.16 Å
R-factor: N/A
AEROSPACI score: 0.76 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-xylanase
    Species: Aspergillus fumigatus Z5 [TaxId:1437362]
    Gene: Y699_04481
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jdza_
  • Chain 'B':
    Compound: Beta-xylanase
    Species: Aspergillus fumigatus Z5 [TaxId:1437362]
    Gene: Y699_04481
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6jdzb_
  • Heterogens: XYP, NAG, GOL, MES, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6jdzA (A:)
aglntaakakglkyfgsatdnpeltdsayvaqlsntddfgqitpgnsmkwdatepsqnsf
sfangdavvnlankngqlmrchtlvwhsqlpnwvssgswtnatllaamknhitnvvthyk
gkcyawdvvnealnedgtfrnsvfyqiigpayipiafataaaadpdvklyyndynieysg
akataaqnivkmikaygakidgvglqahfivgstpsqsdlttvlkgytalgvevayteld
irmqlpstaaklaqqstdfqgvaaacvsttgcvgvtiwdwtdkyswvpsvfqgygaplpw
denyvkkpaydglmaglga

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6jdzB (B:)
aglntaakakglkyfgsatdnpeltdsayvaqlsntddfgqitpgnsmkwdatepsqnsf
sfangdavvnlankngqlmrchtlvwhsqlpnwvssgswtnatllaamknhitnvvthyk
gkcyawdvvnealnedgtfrnsvfyqiigpayipiafataaaadpdvklyyndynieysg
akataaqnivkmikaygakidgvglqahfivgstpsqsdlttvlkgytalgvevayteld
irmqlpstaaklaqqstdfqgvaaacvsttgcvgvtiwdwtdkyswvpsvfqgygaplpw
denyvkkpaydglmaglga