PDB entry 6jdy
View 6jdy on RCSB PDB site
Description: Ligand complex structure of GH10 family xylanase XynAF1, soaking for 120 minutes
Class: hydrolase
Keywords: GH10 family, Thermophilic, Hydrolysis, Complex, HYDROLASE
Deposited on
2019-02-02, released
2020-05-20
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-02.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.57
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Beta-xylanase
Species: Aspergillus fumigatus Z5 [TaxId:1437362]
Gene: Y699_04481
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6jdya_ - Chain 'B':
Compound: Beta-xylanase
Species: Aspergillus fumigatus Z5 [TaxId:1437362]
Gene: Y699_04481
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6jdyb_ - Heterogens: XYP, NAG, PEG, MES, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6jdyA (A:)
aglntaakakglkyfgsatdnpeltdsayvaqlsntddfgqitpgnsmkwdatepsqnsf
sfangdavvnlankngqlmrchtlvwhsqlpnwvssgswtnatllaamknhitnvvthyk
gkcyawdvvnealnedgtfrnsvfyqiigpayipiafataaaadpdvklyyndynieysg
akataaqnivkmikaygakidgvglqahfivgstpsqsdlttvlkgytalgvevayteld
irmqlpstaaklaqqstdfqgvaaacvsttgcvgvtiwdwtdkyswvpsvfqgygaplpw
denyvkkpaydglmaglga
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6jdyB (B:)
aglntaakakglkyfgsatdnpeltdsayvaqlsntddfgqitpgnsmkwdatepsqnsf
sfangdavvnlankngqlmrchtlvwhsqlpnwvssgswtnatllaamknhitnvvthyk
gkcyawdvvnealnedgtfrnsvfyqiigpayipiafataaaadpdvklyyndynieysg
akataaqnivkmikaygakidgvglqahfivgstpsqsdlttvlkgytalgvevayteld
irmqlpstaaklaqqstdfqgvaaacvsttgcvgvtiwdwtdkyswvpsvfqgygaplpw
denyvkkpaydglmaglga