PDB entry 6jdx

View 6jdx on RCSB PDB site
Description: crystal structure of acriic2 dimer in complex with partial nme1cas9 preprocessed with protease alpha-chymotrypsin
Deposited on 2019-02-02, released 2019-05-15
The last revision was dated 2019-08-28, with a file datestamp of 2019-08-23.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: AcrIIC2
    Species: Neisseria meningitidis 8013 [TaxId:604162]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: AcrIIC2
    Species: Neisseria meningitidis 8013 [TaxId:604162]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: CRISPR-associated endonuclease Cas9
    Species: Neisseria meningitidis 8013 [TaxId:604162]
    Gene: cas9, NMV_1993
    Database cross-references and differences (RAF-indexed):
  • Heterogens: EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jdxA (A:)
smsknnifnkyptiihgeargendefvvhtryprflarksfddnftgempakpvngelgq
igeprrlaydsrlglwlsdfimldnnkpknmedwlgqlkaacdriaaddlmlnedaadle
gwdd

    Sequence, based on observed residues (ATOM records):
    >6jdxA (A:)
smsknnifnkyptiihgeargendefvvhtryprflarksfddnftgempakpvngelgq
igeprrlaydsrlglwlsdfimldnnkpknmedwlgqlkaacdriaaddlmlnedaadle
g

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jdxB (B:)
smsknnifnkyptiihgeargendefvvhtryprflarksfddnftgempakpvngelgq
igeprrlaydsrlglwlsdfimldnnkpknmedwlgqlkaacdriaaddlmlnedaadle
gwdd

    Sequence, based on observed residues (ATOM records):
    >6jdxB (B:)
msknnifnkyptiihgeargendefvvhtryprflarksfddnftgempakpvngelgqi
geprrlaydsrlglwlsdfimldnnkpknmedwlgqlkaacdriaaddlmlned

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jdxC (C:)
smaafkpnsinyilgldigiasvgwamveideeenpirlidlgvrvferaevpktgdsla
marrlarsvrrltrrrah

    Sequence, based on observed residues (ATOM records):
    >6jdxC (C:)
eeenpirlidlgvrvferaevpktgdslamarrlarsvrrltrrr