PDB entry 6jdr

View 6jdr on RCSB PDB site
Description: crystal structure of methylated prrsv nsp10 (helicase)
Deposited on 2019-02-02, released 2020-02-05
The last revision was dated 2020-08-19, with a file datestamp of 2020-08-14.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PP1b
    Species: Porcine reproductive and respiratory syndrome virus [TaxId:28344]
    Database cross-references and differences (RAF-indexed):
    • Uniprot J9XNG9
      • engineered mutation (379)
  • Heterogens: ZN, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jdrA (A:)
    gkksrmcgycgapapyatacgldvcvyhthfhqhcpviiwcghpagsgscsecepplgkg
    tspldevleqvpykpprtvimhveqgltpldpgryqtrrglvsvrrgirgnevdlpdgdy
    astallptckeinmvavasnvlrsrfiigppgagkthwllqqvqdgdviytpthqtmldm
    iralgtcrfnvpagttlqfpapsrtgpwvrilaggwcpgknsfldeaaycnhldvlrlls
    kttltclgdfkqlhpvgfdshcyvfdimpqtqlktiwrfgqnicdaiqpdyrdklmsmvn
    ttrvtyvekpvrygqvltpyhrdredsaitidssqgatfdvvtlhlptkdslnrqralva
    itrarhaifvydphrqlqsvfdlpakgtpvnlavhrdeqlivldrnnreitvaqalgngd
    kfratdkrvvdslraicadle
    

    Sequence, based on observed residues (ATOM records):
    >6jdrA (A:)
    srmcgycgapapyatacgldvcvyhthfhqhcpviiwcghpagsgscsecepplgkgtsp
    ldevleqvpykpprtvimhveqgltpldpgryqtrrglvsvrrgirgnevdlpdgdyast
    allptckeinmvavasnvlrsrfiigppgagkthwllqqvqdgdviytpthqtmldmira
    lgtcrfnvpagttlqfpapsrtgpwvrilaggwcpgknsfldeaaycnhldvlrllsktt
    ltclgdfkqlhpvgfdshcyvfdimpqtqlktiwrfgqnicdaiqpdyrdklmsmvnttr
    vtyvekpvrygqvltpyhrdredsaitidssqgatfdvvtlhlptkdslnrqralvaitr
    arhaifvydphrqlqsvfdlpakgtpvnlavhrdeqlivldrnnreitvaqalgngdkfr
    atdkrvvdsl