PDB entry 6jde

View 6jde on RCSB PDB site
Description: crystal structure of a dna repair protein
Deposited on 2019-02-01, released 2019-06-26
The last revision was dated 2019-08-14, with a file datestamp of 2019-08-09.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative DNA repair helicase RadD
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: radD, yejH, yejI, yejJ, b2184, JW2172
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Putative DNA repair helicase RadD
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: radD, yejH, yejI, yejJ, b2184, JW2172
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jdeA (A:)
miftlrpyqqeavdatlnhfrrhktpavivlptgagkslviaelarlargrvlvlahvke
lvaqnhakyqalgleadifaaglkrkeshgkvvfgsvqsvarnldafqgefsllivdech
rigddeesqyqqilthltkvnphlrllgltatpfrlgkgwiyqfhyhgmvrgdekalfrd
ciyelplrymikhgyltpperldmpvvqydfsrlqaqsnglfseadlnrelkkqqritph
iisqimefaatrkgvmifaatvehakeivgllpaedaalitgdtpgaerdvlienfkaqr
frylvnvavlttgfdaphvdliailrptesvslyqqivgrglrlapgktdclildyagnp
hdlyapevgtpkgksdnvpvqvfcpacgfantfwgkttadgtliehfgrrcqgwfedddg
hreqcdfrfrfkncpqcnaendiaarrcrecdtvlvdpddmlkaalrlkdalvlrcsgms
lqhghdekgewlkityydedgadvserfrlqtpaqrtafeqlfirphtrtpgiplrwita
adilaqqallrhpdfvvarmkgqywqvrekvfdyegrfrlahelrg

    Sequence, based on observed residues (ATOM records):
    >6jdeA (A:)
ftlrpyqqeavdatlnhfrrhktpavivlptgagkslviaelarlargrvlvlahvkelv
aqnhakyqalgleadifaaghgkvvfgsvqsvarnldafqgefsllivdechrigddees
qyqqilthltkvnphlrllgltatpfrlgkgwiyqfhyhgmvrgdekalfrdciyelplr
ymikhgyltpperldmpvvqydfsrlqaqsnglfseadlnrelkkqqritphiisqimef
aatrkgvmifaatvehakeivgllpaedaalitgdtpgaerdvlienfkaqrfrylvnva
vlttgfdaphvdliailrptesvslyqqivgrglrlapgktdclildyagnphdlyapev
gtpkgksdnvpvqvfcpacgfantfwgkttadgtliehfgrrcqgwfedddghreqcdfr
frfknpqcnaendaarcdtvlvdpddmlkaalrlkdalvlrcsgmslqhghdekgewlki
tyydedgadvserfrlqtpaqrtafeqlfirphtrtpgiplrwitaadilaqqallrhpd
fvvarmkgqywqvrekvfdy

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jdeB (B:)
miftlrpyqqeavdatlnhfrrhktpavivlptgagkslviaelarlargrvlvlahvke
lvaqnhakyqalgleadifaaglkrkeshgkvvfgsvqsvarnldafqgefsllivdech
rigddeesqyqqilthltkvnphlrllgltatpfrlgkgwiyqfhyhgmvrgdekalfrd
ciyelplrymikhgyltpperldmpvvqydfsrlqaqsnglfseadlnrelkkqqritph
iisqimefaatrkgvmifaatvehakeivgllpaedaalitgdtpgaerdvlienfkaqr
frylvnvavlttgfdaphvdliailrptesvslyqqivgrglrlapgktdclildyagnp
hdlyapevgtpkgksdnvpvqvfcpacgfantfwgkttadgtliehfgrrcqgwfedddg
hreqcdfrfrfkncpqcnaendiaarrcrecdtvlvdpddmlkaalrlkdalvlrcsgms
lqhghdekgewlkityydedgadvserfrlqtpaqrtafeqlfirphtrtpgiplrwita
adilaqqallrhpdfvvarmkgqywqvrekvfdyegrfrlahelrg

    Sequence, based on observed residues (ATOM records):
    >6jdeB (B:)
iftlrpyqqeavdatlnhfrrhktpavivlptgagkslviaelarlargrvlvlahvkel
vaqnhakyqalgleadifaageshgkvvfgsvqsvarnldafqgefsllivdechrigde
sqyqqilthltkvnphlrllgltatpfrlgkgwiyqfhyhgmvrgdekalfrdciyelpl
rymikhgyltpperldmpvvqydfsrlqaqsnglfseadlnrelkkqqritphiisqime
faatrkgvmifaatvehakeivgllpaedaalitgdtpgaerdvlienfkaqrfrylvnv
avlttgfdaphvdliailrptesvslyqqivgrglrlapgktdclildyagnphdlyape
vgtpkksdnvpvqvfcpacgfantfwgkttadgtliehfgrrcqgwfedddghreqcdfr
frfkncqcnaendiaarrccdtvlvdpddmlkaalrlkdalvlrcsgmslqhghdekgew
lkityydedgadvserfrlqtpaqrtafeqlfirphtrtpgiplrwitaadilaqqallr
hpdfvvarmkgqywqvrekvfdyegrf