PDB entry 6jc6

View 6jc6 on RCSB PDB site
Description: Crystal structure of the purple chromoprotein of Stichodactyla haddoni with a Glu-Tyr-Gly tri-peptide chromophore
Class: fluorescent protein
Keywords: Sea anemone, Green fluorescent protein, UV absorption; emission spectra, biomarker, FLUORESCENT PROTEIN
Deposited on 2019-01-28, released 2019-03-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-03-20, with a file datestamp of 2019-03-15.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6a1, d6jc6a2
  • Chain 'B':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6b1, d6jc6b2
  • Chain 'C':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6c1, d6jc6c2
  • Chain 'D':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6d1, d6jc6d2
  • Chain 'E':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6e_
  • Chain 'F':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6f_
  • Chain 'G':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6g_
  • Chain 'H':
    Compound: shCP
    Species: Stichodactyla haddoni [TaxId:475174]
    Database cross-references and differences (RAF-indexed):
    • PDB 6JC6 (Start-227)
    Domains in SCOPe 2.08: d6jc6h_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6jc6A (A:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6A (A:)
gllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapcc
xsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlgt
nfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkair
altmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6jc6B (B:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6B (B:)
hgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapc
cxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlg
tnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkai
raltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6jc6C (C:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6C (C:)
gllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapcc
xsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlgt
nfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkair
altmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6jc6D (D:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6D (D:)
gllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapcc
xsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlgt
nfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkair
altmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6jc6E (E:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6E (E:)
llkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapccx
srtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlgtn
fpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkaira
ltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6jc6F (F:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6F (F:)
llkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapccx
srtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlgtn
fpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkaira
ltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >6jc6G (G:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6G (G:)
llkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapccx
srtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlgtn
fpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkaira
ltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6jc6H (H:)
mhhhhhhgllkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfaf
dilapccxsrtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliy
kvkvlgtnfpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssy
kskkairaltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek

    Sequence, based on observed residues (ATOM records): (download) 
    >6jc6H (H:)
llkesmrikmdmegtvnghyfkcegegdgnpftgtqsmrihvtegaplpfafdilapccx
srtfihhtagipdffkqsfpegftwertttyedggiltahqdtslegncliykvkvlgtn
fpadgpvmknksegwepctevvypdngvlcgrnvmalkvgdrrlichlyssykskkaira
ltmpgfhftdirlqmprkkkdeyfelyeasvarysdlpek