PDB entry 6jbo

View 6jbo on RCSB PDB site
Description: crystal structure of efeo-like protein algp7 containing samarium ion
Deposited on 2019-01-26, released 2020-01-29
The last revision was dated 2020-01-29, with a file datestamp of 2020-01-24.
Experiment type: XRAY
Resolution: 1.88 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alginate-binding protein
    Species: Sphingomonas sp. A1 [TaxId:90322]
    Gene: p7
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q25C86 (Start-274)
      • expression tag (275)
  • Chain 'B':
    Compound: Alginate-binding protein
    Species: Sphingomonas sp. A1 [TaxId:90322]
    Gene: p7
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q25C86 (Start-274)
      • expression tag (275)
  • Heterogens: EDO, SM, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jboA (A:)
vmkqylsrlasltlfvgfmsaaqaavapldlvqpisdykiyvsenlqtlvrdtreftnav
kagdvakakklfastrmsyeriepiaelfsdldasidsraddhekaekdpaffgfhriey
glfaqnsakglapvadklmadvlelqkrirgltfppekvvggaavlmeevaatkisgeed
ryshtdlwdfqanfegakkivdlfrplvvkdnrafadkvdanfdtvfktlakyrtadggf
elygklserdrkvlagrvntlaedlskmrgllgldlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6jboA (A:)
vapldlvqpisdykiyvsenlqtlvrdtreftnavkagdvakakklfastrmsyeriepi
aelfsdldasidsraddhekaekdpaffgfhrieyglfaqnsakglapvadklmadvlel
qkrirgltfppekvvggaavlmeevaatkisgeedryshtdlwdfqanfegakkivdlfr
plvvkdnrafadkvdanfdtvfktlakyrtadggfelygklserdrkvlagrvntlaedl
skmrgllgldl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jboB (B:)
vmkqylsrlasltlfvgfmsaaqaavapldlvqpisdykiyvsenlqtlvrdtreftnav
kagdvakakklfastrmsyeriepiaelfsdldasidsraddhekaekdpaffgfhriey
glfaqnsakglapvadklmadvlelqkrirgltfppekvvggaavlmeevaatkisgeed
ryshtdlwdfqanfegakkivdlfrplvvkdnrafadkvdanfdtvfktlakyrtadggf
elygklserdrkvlagrvntlaedlskmrgllgldlehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6jboB (B:)
vapldlvqpisdykiyvsenlqtlvrdtreftnavkagdvakakklfastrmsyeriepi
aelfsdldasidsraddhekaekdpaffgfhrieyglfaqnsakglapvadklmadvlel
qkrirgltfppekvvggaavlmeevaatkisgeedryshtdlwdfqanfegakkivdlfr
plvvkdnrafadkvdanfdtvfktlakyrtadggfelygklserdrkvlagrvntlaedl
skmrgllgldl