PDB entry 6jb5
View 6jb5 on RCSB PDB site
Description: Crystal structure of nanobody D3-L11 mutant Y102A in complex with hen egg-white lysozyme (form II)
Class: immune system/hydrolase
Keywords: nanobody, hot-spot mutagenesis, thermodynamics, biomolecular recognition, IMMUNE SYSTEM, IMMUNE SYSTEM-HYDROLASE complex
Deposited on
2019-01-25, released
2019-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-11-13, with a file datestamp of
2019-11-08.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Nanobody D3-L11
Species: Camelus dromedarius [TaxId:9838]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6jb5a_ - Chain 'B':
Compound: Lysozyme C
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6jb5b_ - Heterogens: CL, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6jb5A (A:)
dvqlvesgggsvqaggslrlscaasgstdsieymtwfrqapgkaregvaalythtgntyy
tdsvkgrftisqdkaknmaylrmdsvksedtaiytcgatrkavpvrfaldqssydywgqg
tqvtvsssaghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>6jb5A (A:)
dvqlvesgggsvqaggslrlscaasgstdsieymtwfrqapgkaregvaalythtgntyy
tdsvkgrftisqdkaknmaylrmdsvksedtaiytcgatrkavpvrfaldqssydywgqg
tqvtvs
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>6jb5B (B:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl