PDB entry 6jat

View 6jat on RCSB PDB site
Description: crystal structure of setd3 bound to actin peptide and sfg
Deposited on 2019-01-25, released 2020-01-29
The last revision was dated 2020-01-29, with a file datestamp of 2020-01-24.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone-lysine N-methyltransferase setd3
    Species: Homo sapiens [TaxId:9606]
    Gene: SETD3, C14orf154
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Actin, gamma-enteric smooth muscle
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Histone-lysine N-methyltransferase setd3
    Species: Homo sapiens [TaxId:9606]
    Gene: SETD3, C14orf154
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Actin, gamma-enteric smooth muscle
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SFG, SO4, EPE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6jatA (A:)
smgkksrvktqksgtgatatvspkeilnltsellqkcsspapgpgkeweeyvqirtlvek
irkkqkglsvtfdgkredyfpdlmkwasengasvegfemvnfkeegfglratrdikaeel
flwvprkllmtvesaknsvlgplysqdrilqamgnialafhllceraspnsfwqpyiqtl
pseydtplyfeedevrylqstqaihdvfsqykntarqyayfykviqthphanklplkdsf
tyedyrwavssvmtrqnqiptedgsrvtlaliplwdmcnhtnglittgynleddrcecva
lqdfrageqiyifygtrsnaefvihsgfffdnnshdrvkiklgvsksdrlyamkaevlar
agiptssvfalhfteppisaqllaflrvfcmteeelkehllgdsaidriftlgnsefpvs
wdnevklwtfledraslllktykttieedksvlknhdlsvrakmaiklrlgekeilekav
ksaavnreyyrqqmeekap

    Sequence, based on observed residues (ATOM records):
    >6jatA (A:)
spkeilnltsellqkcsspapgpgkeweeyvqirtlvekirkkqkglsvtfdgkredyfp
dlmkwasengasvegfemvnfkeegfglratrdikaeelflwvprkllmtvesaknsvlg
plysqdrilqamgnialafhllceraspnsfwqpyiqtlpseydtplyfeedevrylqst
qaihdvfsqykntarqyayfykviqthphanklplkdsftyedyrwavssvmtrqnqipt
edgsrvtlaliplwdmcnhtnglittgynleddrcecvalqdfrageqiyifygtrsnae
fvihsgfffdnnshdrvkiklgvsksdrlyamkaevlaragiptssvfalhfteppisaq
llaflrvfcmteeelkehllgdsaidriftlgnsefpvswdnevklwtfledraslllkt
ykttieedksvlknhdlsvrakmaiklrlgekeilekavksaavnreyyrqqmee

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6jatB (B:)
skrgiltlkypiehgiitnwdd

    Sequence, based on observed residues (ATOM records):
    >6jatB (B:)
tlkypiehgiitnwdd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6jatC (C:)
smgkksrvktqksgtgatatvspkeilnltsellqkcsspapgpgkeweeyvqirtlvek
irkkqkglsvtfdgkredyfpdlmkwasengasvegfemvnfkeegfglratrdikaeel
flwvprkllmtvesaknsvlgplysqdrilqamgnialafhllceraspnsfwqpyiqtl
pseydtplyfeedevrylqstqaihdvfsqykntarqyayfykviqthphanklplkdsf
tyedyrwavssvmtrqnqiptedgsrvtlaliplwdmcnhtnglittgynleddrcecva
lqdfrageqiyifygtrsnaefvihsgfffdnnshdrvkiklgvsksdrlyamkaevlar
agiptssvfalhfteppisaqllaflrvfcmteeelkehllgdsaidriftlgnsefpvs
wdnevklwtfledraslllktykttieedksvlknhdlsvrakmaiklrlgekeilekav
ksaavnreyyrqqmeekap

    Sequence, based on observed residues (ATOM records):
    >6jatC (C:)
spkeilnltsellqkcsspapgpgkeweeyvqirtlvekirkkqkglsvtfdgkredyfp
dlmkwasengasvegfemvnfkeegfglratrdikaeelflwvprkllmtvesaknsvlg
plysqdrilqamgnialafhllceraspnsfwqpyiqtlpseydtplyfeedevrylqst
qaihdvfsqykntarqyayfykviqthphanklplkdsftyedyrwavssvmtrqnqipt
edgsrvtlaliplwdmcnhtnglittgynleddrcecvalqdfrageqiyifygtrsnae
fvihsgfffdnnshdrvkiklgvsksdrlyamkaevlaragiptssvfalhfteppisaq
llaflrvfcmteeelkehllgdsaidriftlgnsefpvswdnevklwtfledraslllkt
ykttieedksvlknhdlsvrakmaiklrlgekeilekavksaavnreyyrqq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6jatD (D:)
skrgiltlkypiehgiitnwdd

    Sequence, based on observed residues (ATOM records):
    >6jatD (D:)
lkypiehgiitnwdd