PDB entry 6jag
View 6jag on RCSB PDB site
Description: Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with sucrose
Class: sugar binding protein
Keywords: Carbohydrate-bindingsite, alpha-glycoside-binding protein, Ligand selection, Multi-substrate transporter, Sugar replacement, Venus Fly-trap mechanism, SUGAR BINDING PROTEIN
Deposited on
2019-01-24, released
2019-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-02.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ABC transporter, periplasmic substrate-binding protein
Species: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) [TaxId:300852]
Gene: TTHA0356
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6jaga1, d6jaga2 - Heterogens: GLC, FRU, CIT, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6jagA (A:)
qsgpvirvagdstavgeggrwmkemveawgkktgtrveyidspadtndrlalyqqywaar
spdvdvymidviwpgivaphaldlkpylteaelkeffprivqnntirgkltslpfftdag
ilyyrkdllekygytspprtwneleqmaervmegerragnrdfwgfvfqgkpyegltcda
lewiyshgggrivepdgtisvnngraalalnrahgwvgriapqgvtsyaeeearnvwqqg
nslfmrnwpyayalgqaegspirgkfgvtvlpkasadapnaatlggwqlmvsaysrypke
avdlvkylasyevqkdnavrlsrlptrpalytdrdvlarnpwfrdllpvfqnavsrpsdv
agarynqvseaiwtevhsvltgrkkgeqavrdlearirrilrhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>6jagA (A:)
gpvirvagdstavgeggrwmkemveawgkktgtrveyidspadtndrlalyqqywaarsp
dvdvymidviwpgivaphaldlkpylteaelkeffprivqnntirgkltslpfftdagil
yyrkdllekygytspprtwneleqmaervmegerragnrdfwgfvfqgkpyegltcdale
wiyshgggrivepdgtisvnngraalalnrahgwvgriapqgvtsyaeeearnvwqqgns
lfmrnwpyayalgqaegspirgkfgvtvlpkasadapnaatlggwqlmvsaysrypkeav
dlvkylasyevqkdnavrlsrlptrpalytdrdvlarnpwfrdllpvfqnavsrpsdvag
arynqvseaiwtevhsvltgrkkgeqavrdlearirrilrhhhh