PDB entry 6j7x
View 6j7x on RCSB PDB site
Description: Complex of GGTaseIII, farnesyl-Ykt6, and GGPP
Class: lipid binding protein
Keywords: lipid transferase, LIPID BINDING PROTEIN
Deposited on
2019-01-18, released
2020-01-22
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-01-29, with a file datestamp of
2020-01-24.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: N/A
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Protein prenyltransferase alpha subunit repeat-containing protein 1
Species: Homo sapiens [TaxId:9606]
Gene: PTAR1
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Geranylgeranyl transferase type-2 subunit beta
Species: Homo sapiens [TaxId:9606]
Gene: Rabggtb, Ggtb
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6j7xb_ - Chain 'C':
Compound: Synaptobrevin homolog YKT6
Species: Homo sapiens [TaxId:9606]
Gene: YKT6
Database cross-references and differences (RAF-indexed):
- Heterogens: GRG, FMT
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6j7xB (B:)
gplgsmgtpqkdviiksdapdtlllekhadyiasygskkddyeycmseylrmsgiywglt
vmdlmgqlhrmnreeilafikscqhecggisasighdphllytlsavqiltlydsinvid
vnkvveyvkglqkedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscm
nfdggfgcrpgseshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpek
lpdvcyswwvlaslkiigrlhwidreklrnfilacqdeetggfadrpgdmvdpfhtlfgi
aglsllgeeqikpvnpvfcmpeevlqrvnvqpelvs
Sequence, based on observed residues (ATOM records): (download)
>6j7xB (B:)
qkdviiksdapdtlllekhadyiasygskkddyeycmseylrmsgiywgltvmdlmgqlh
rmnreeilafikscqhecggisasighdphllytlsavqiltlydsinvidvnkvveyvk
glqkedgsfagdiwgeidtrfsfcavatlallgkldainvekaiefvlscmnfdggfgcr
pgseshagqiycctgflaitsqlhqvnsdllgwwlcerqlpsgglngrpeklpdvcysww
vlaslkiigrlhwidreklrnfilacqdeetggfadrpgdmvdpfhtlfgiaglsllgee
qikpvnpvfcmpeevlqrvnvqpelvs
- Chain 'C':
No sequence available.