PDB entry 6j5u

View 6j5u on RCSB PDB site
Description: ligand-triggered allosteric adp release primes a plant nlr complex
Deposited on 2019-01-12, released 2019-04-03
The last revision was dated 2019-11-06, with a file datestamp of 2019-11-01.
Experiment type: EM
Resolution: 3.9 Å
R-factor: N/A
AEROSPACI score: 0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Disease resistance RPP13-like protein 4
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: RPP13L4, ZAR1, At3g50950, F18B3.230
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Protein kinase superfamily protein
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: F15B8.100, Resistance related KinaSe 1, RKS1, At3g57710
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Probable serine/threonine-protein kinase PBL2
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: PBL2, APK2A, KIN1, At1g14370, F14L17.14
    Database cross-references and differences (RAF-indexed):
  • Heterogens: BQL, BQO

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6j5uA (A:)
mvdavvtvflektlnileekgrtvsdyrkqledlqselkymqsflkdaerqkrtnetlrt
lvadlrelvyeaedilvdcqladgddgneqrssnawlsrlhparvplqykkskrlqeine
ritkiksqvepyfefitpsnvgrdngtdrwsspvydhtqvvglegdkrkikewlfrsnds
qllimafvgmgglgkttiaqevfndkeiehrferriwvsvsqtfteeqimrsilrnlgda
svgddigtllrkiqqyllgkrylivmddvwdknlswwdkiyqglprgqggsvivttrses
vakrvqarddkthrpellspdnswllfcnvafaandgtcerpeledvgkeivtkckglpl
tikavgglllckdhvyhewrriaehfqdelrgntsetdnvmsslqlsydelpshlkscil
tlslypedcvipkqqlvhgwigegfvmwrngrsatesgedcfsgltnrclievvdktysg
tiitckihdmvrdlvidiakkdsfsnpeglncrhlgisgnfdekqikvnhklrgvvsttk
tgevnklnsdlakkftdckylrvldisksifdaplseildeiaslqhlaclslsnthpli
qfprsmedlhnlqildasycqnlkqlqpcivlfkkllvldmtncgslecfpkgigslvkl
evllgfkparsnngcklsevknltnlrklglsltrgdqieeeeldslinlsklmsisinc
ydsygddlitkidaltpphqlhelslqfypgksspswlsphklpmlrymsicsgnlvkmq
epfwgnenthwrieglmlsslsdldmdwevlqqsmpylrtvtanwcpelesfaiedvgfr
ggvwmktplhrt

    Sequence, based on observed residues (ATOM records):
    >6j5uA (A:)
mvdavvtvflektlnileekgrtvsdyrkqledlqselkymqsflkdaerqkrtnetlrt
lvadlrelvyeaedilvdcqladgddgneqrssnawlsrlhparvplqykkskngtdrws
spvydhtqvrpellspdnswllfcnvafaandgtcerpeledvgkeivtkckglpltika
vgglllckdhvyhewrriaehfqdelrgntsetdnvmsslqlsydelpshlksciltlsl
ypedcvipkqqlvhgwigegfvmwrngrsatesgedcfsgltnrclievvdktysgtiit
ckihdmvrdlvidiakkdsfsnpeglncrhlgisgnfdekqikvnhklrgvvsttktgev
nklnsdlakkftdckylrvldisksifdaplseildeiaslqhlaclslsnthpliqfpr
smedlhnlqildasycqnlkqlqpcivlfkkllvldmtncgslecfpkgigslvklevll
gfkparsnngcklsevknltnlrklglsltrgdqieeeeldslinlsklmsisincydsy
gddlitkidaltpphqlhelslqfypgksspswlsphklpmlrymsicsgnlvkmqepfw
gnenthwrieglmlsslsdldmdwevlqqsmpylrtvtanwcpelesfaiedvgfrggvw
mkt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6j5uB (B:)
mkkqylksgsgtrkekdkakrwfldngsiflrelvadcngksipirsfspeqilkatnnf
dsscfvsqdvyykwyrgeiedrsymikrfsedeitgkrhrvkevyndivlsarmsnhsnf
lqllgcclefpfpvlvfefaehgamnqrggvivngeesllpwsvrlkigkeianavtylh
tafpkiiihrdvkpmhvfldknwtaklsdlsfsislpegksrieaewvlgtfgyidplyh
ktcfvteytdvysfgicllviitgkpaimtisdgdlqgilslvrelcengkldevidprl
mkditsgqrlqveacvvlalrcckerdedrpkmiqvakelkqieaslknss

    Sequence, based on observed residues (ATOM records):
    >6j5uB (B:)
dkakrwfldngsiflrelvadcngksipirsfspeqilkatnnfdsscfvsqdvyykwyr
geiedrsymikrfsedeitgkrhrvkevyndivlsarmsnhsnflqllgcclefpfpvlv
fefaehgamnqrggvivnllpwsvrlkigkeianavtylhtafpkiiihrdvkpmhvfld
knwtaklsdlsfsislpegksrieaewvlgtfgyidplyhktcfvteytdvysfgicllv
iitgkpaimtisdgdlqgilslvrelcengkldevidprlmkditsgqrlqveacvvlal
rcckerdedrpkmiqvakelkqieasl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6j5uC (C:)
mgncldssakvdnsnhsphansassgskvssktsrstgpsglsttsystdssfgplptlr
tegeilsspnlkaftfnelknatknfrqdnllgeggfgcvfkgwidqtsltasrpgsgiv
vavkqlkpegfqghkewltevnylgqlshpnlvllvgycaegenrllvyefmpkgslenh
lfrrgaqpltwairmkvavgaakgltflheaksqviyrdfkaanilldadfnaklsdfgl
akagptgdnthvstkvigthgyaapeyvatgrltaksdvysfgvvllelisgrramdnsn
ggneyslvdwatpylgdkrklfrimdtklggqypqkgaftaanlalqclnpdaklrpkms
evlvtleqlesvakpgtkhtqmesprfhhssvmqkspvryshdrpllhmtpgasplpsyt
qsprvr

    Sequence, based on observed residues (ATOM records):
    >6j5uC (C:)
mpkgslenhlfrrgaqpltwairmkvavgaakgltflheaksqviyrdfkaanilldadf
naklsdfthvkvigthgyaapeyvatgrltaksdvysfgvvllelisgrramdnyslvdw
atpyllfrimdtklggqypqkgaftaanlalqclnpdaklrpkmsevlvtle