PDB entry 6j5g

View 6j5g on RCSB PDB site
Description: complex structure of mab 4.2-scfv with tick-borne encephalitis virus envelope protein
Deposited on 2019-01-10, released 2019-02-06
The last revision was dated 2019-04-17, with a file datestamp of 2019-04-12.
Experiment type: XRAY
Resolution: 3.29 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope protein E
    Species: Tick-borne encephalitis virus European subtype (strain Neudoerfl) [TaxId:11088]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: antibody heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J5G (0-119)
  • Chain 'L':
    Compound: Antibody Light Chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J5G (0-End)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6j5gA (A:)
srcthlenrdfvtgtqgttrvtlvlelggcvtitaegkpsmdvwldaiyqenpaktreyc
lhaklsdtkvaarcptmgpatlaeehqggtvckrdqsdrgwgnhcglfgkgsivacvkaa
ceakkkatghvydankivytvkvephtgdyvaanethsgrktasftissektiltmgeyg
dvsllcrvasgvdlaqtvileldktvehlptawqvhrdwfndlalpwkhegaqnwnnaer
lvefgaphavkmdvynlgdqtgvllkalagvpvahiegtkyhlksghvtcevgleklkmk
gltytmcdktkftwkraptdsghdtvvmevtfsgtkpcripvravahgspdvnvamlitp
nptienngggfiemqlppgdniiyvgelshqwfqkgssigrhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6j5gA (A:)
srcthlenrdfvtgtqgttrvtvlelggcvtitaegkpsmdvwldaiyqenpaktreycl
haklsdtkvaarcptmgpatlaeehqggtvckrdqsdrgwgnhcglfgkgsivacvkaac
eakkkatghvydankivytvkvepgrktasftissektiltmgeygdvlcrvasgvdlaq
tvileldktvehlptawqvhrdwfndlalpwkhegaqnwnnaerlvefgaphavkmdvyn
lgdqtgvllkalagvpvahiegtkyhlksghvtcevgleytmcdktkftwkraptdsghd
tvvmevtfsgtkpcripvravahgspdvnvamlitpnptienngggfiemqlppgdniiy
vgelshqwfqkgs

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6j5gH (H:)
qvqlqqsgpelvkpgasvkmsckasgytftdyvigwvkqrtgqglewigeiypgsgttyy
nekfkdkatltadkssntaymqlssltsedsavyfcargedgyyialdywgqgttvtvss

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6j5gL (L:)
dieltqspaslsasvgetvtitcrasgnihnylawyqqkqgkspqllvykaqtladgvps
rfsgsgsgtqyslkinslqpedfgsyycqhfwstppwtfgggtkleikr

    Sequence, based on observed residues (ATOM records):
    >6j5gL (L:)
dieltqspaslsasvgetvtitcrasgnihnylawyqqkqgkspqllvykaqtladgvps
rfsgsgsgtqyslkinslqpedfgsyycqhfwstppwtfgggtkleik