PDB entry 6j5e

View 6j5e on RCSB PDB site
Description: crystal structure of hiv-1 fusion inhibitor sc29ek complexed with gp41 nhr (n44)
Deposited on 2019-01-10, released 2020-01-15
The last revision was dated 2020-01-15, with a file datestamp of 2020-01-10.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'G':
    Compound: Envelope glycoprotein
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: sc29ek
    Species: Human immunodeficiency virus 1, synthetic [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J5E (Start-28)
  • Chain 'I':
    Compound: Envelope glycoprotein
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: sc29ek
    Species: Human immunodeficiency virus 1, synthetic [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J5E (Start-28)
  • Chain 'K':
    Compound: Envelope glycoprotein
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: sc29ek
    Species: Human immunodeficiency virus 1, synthetic [TaxId:11676]
    Database cross-references and differences (RAF-indexed):
    • PDB 6J5E (Start-28)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6j5eG (G:)
tvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqaril

    Sequence, based on observed residues (ATOM records):
    >6j5eG (G:)
arqllsgivqqqnnllraieaqqhllqltvwgikqlqari

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6j5eH (H:)
weewdkkieeytkkieelikkseeqqkkn

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6j5eI (I:)
tvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqaril

    Sequence, based on observed residues (ATOM records):
    >6j5eI (I:)
llsgivqqqnnllraieaqqhllqltvwgikqlqari

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >6j5eJ (J:)
weewdkkieeytkkieelikkseeqqkkn

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6j5eK (K:)
tvqarqllsgivqqqnnllraieaqqhllqltvwgikqlqaril

    Sequence, based on observed residues (ATOM records):
    >6j5eK (K:)
qarqllsgivqqqnnllraieaqqhllqltvwgikqlqaril

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6j5eL (L:)
weewdkkieeytkkieelikkseeqqkkn